msqc1

Sigma mix MSQC1 data

Bioconductor version: Release (3.20)

contains eight technical replicate data set and a three replicate dilution series of the MS Qual/Quant Quality Control Mix standard sample (Sigma-Aldrich, Buchs, Switzerland) measured on five different mass spectrometer platforms at the Functional Genomics Center Zurich.

Author: Tobias Kockmann [aut] , Christian Trachsel [aut], Christian Panse [aut, cre]

Maintainer: Christian Panse <cp at fgcz.ethz.ch>

Citation (from within R, enter citation("msqc1")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("msqc1")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("msqc1")

ASMS 2016 poster (in portrait) abstract ID number: 282492	PDF	R Script
Introducing msqc1 - A Mass Spec Data set for Targeted Proteomics Performance Evaluation	HTML	R Script
LC Observations - Retention Time Stability	HTML	R Script
Reference Manual	PDF
NEWS	Text

Need some help? Ask on the Bioconductor Support site!

Details

biocViews	ExperimentData, MassSpectrometryData, ReproducibleResearch
Version	1.34.0
License	GPL
Depends	R (>= 3.6), lattice, stats, utils
Imports
System Requirements
URL	https://panoramaweb.org/labkey/MSQC1.url http://fgcz-bfabric.uzh.ch/bfabric/project.html?projectId=1959

Suggests	BiocStyle, knitr, rmarkdown, testthat, specL(>= 1.2)
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report	Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	msqc1_1.34.0.tar.gz
Windows Binary (x86_64)
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository	git clone https://git.bioconductor.org/packages/msqc1
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/msqc1
Package Short Url	https://bioconductor.org/packages/msqc1/
Package Downloads Report	Download Stats