CaCORE::CaBIO::Agent - Perl extension for Agent.
The CaCORE::CaBIO::Agent is a Perl object representation of the CaCORE Agent object.
See the CaCORE::ApplicationService manpage.
The following are all the attributes of the Agent object and their data types:
data type: string
data type: long
data type: string
data type: string
data type: long
data type: boolean
data type: string
data type: string
Note: Although you can also use the corresponding setter methods to set the attribute values, it is not recommended to do so unless you absolutely have to change the object's attributes.
The following are all the objects that are associated with the Agent:
One to many assoication, use getClinicalTrialProtocolCollection
to get a collection of associated ClinicalTrialProtocol.
One to many assoication, use getTargetCollection
to get a collection of associated Target.
CaCORE::CaBIO::Anomaly - Perl extension for Anomaly.
The CaCORE::CaBIO::Anomaly is a Perl object representation of the CaCORE Anomaly object.
See the CaCORE::ApplicationService manpage.
The following are all the attributes of the Anomaly object and their data types:
data type: string
data type: string
data type: long
Note: Although you can also use the corresponding setter methods to set the attribute values, it is not recommended to do so unless you absolutely have to change the object's attributes.
The following are all the objects that are associated with the Anomaly:
Many to one assoication, use getHistopathology
to get the associated Histopathology.
One to many assoication, use getOrganOntologyCollection
to get a collection of associated OrganOntology.
One to many assoication, use getVocabularyCollection
to get a collection of associated Vocabulary.
CaCORE::CaBIO::Chromosome - Perl extension for Chromosome.
The CaCORE::CaBIO::Chromosome is a Perl object representation of the CaCORE Chromosome object.
See the CaCORE::ApplicationService manpage.
The following are all the attributes of the Chromosome object and their data types:
data type: string
data type: long
data type: string
Note: Although you can also use the corresponding setter methods to set the attribute values, it is not recommended to do so unless you absolutely have to change the object's attributes.
The following are all the objects that are associated with the Chromosome:
One to many assoication, use getGeneCollection
to get a collection of associated Gene.
One to many assoication, use getLocationCollection
to get a collection of associated Location.
Many to one assoication, use getTaxon
to get the associated Taxon.
CaCORE::CaBIO::ClinicalTrialProtocol - Perl extension for ClinicalTrialProtocol.
The CaCORE::CaBIO::ClinicalTrialProtocol is a Perl object representation of the CaCORE ClinicalTrialProtocol object.
See the CaCORE::ApplicationService manpage.
The following are all the attributes of the ClinicalTrialProtocol object and their data types:
data type: string
data type: string
data type: string
data type: string
data type: string
data type: dateTime
data type: string
data type: long
data type: string
data type: string
data type: string
data type: string
data type: string
data type: string
Note: Although you can also use the corresponding setter methods to set the attribute values, it is not recommended to do so unless you absolutely have to change the object's attributes.
The following are all the objects that are associated with the ClinicalTrialProtocol:
One to many assoication, use getAgentCollection
to get a collection of associated Agent.
One to many assoication, use getDiseaseOntologyCollection
to get a collection of associated DiseaseOntology.
One to many assoication, use getHistopathologyCollection
to get a collection of associated Histopathology.
One to many assoication, use getProtocolAssociationCollection
to get a collection of associated ProtocolAssociation.
CaCORE::CaBIO::Clone - Perl extension for Clone.
The CaCORE::CaBIO::Clone is a Perl object representation of the CaCORE Clone object.
See the CaCORE::ApplicationService manpage.
The following are all the attributes of the Clone object and their data types:
data type: string
data type: long
data type: long
data type: string
data type: string
Note: Although you can also use the corresponding setter methods to set the attribute values, it is not recommended to do so unless you absolutely have to change the object's attributes.
The following are all the objects that are associated with the Clone:
One to many assoication, use getCloneRelativeLocationCollection
to get a collection of associated CloneRelativeLocation.
Many to one assoication, use getLibrary
to get the associated Library.
One to many assoication, use getNucleicAcidSequenceCollection
to get a collection of associated NucleicAcidSequence.
One to many assoication, use getTaxonCollection
to get a collection of associated Taxon.
CaCORE::CaBIO::CloneRelativeLocation - Perl extension for CloneRelativeLocation.
The CaCORE::CaBIO::CloneRelativeLocation is a Perl object representation of the CaCORE CloneRelativeLocation object.
See the CaCORE::ApplicationService manpage.
The following are all the attributes of the CloneRelativeLocation object and their data types:
data type: string
data type: long
data type: string
Note: Although you can also use the corresponding setter methods to set the attribute values, it is not recommended to do so unless you absolutely have to change the object's attributes.
The following are all the objects that are associated with the CloneRelativeLocation:
Many to one assoication, use getClone
to get the associated Clone.
Many to one assoication, use getNucleicAcidSequence
to get the associated NucleicAcidSequence.
CaCORE::CaBIO::Cytoband - Perl extension for Cytoband.
The CaCORE::CaBIO::Cytoband is a Perl object representation of the CaCORE Cytoband object.
See the CaCORE::ApplicationService manpage.
The following are all the attributes of the Cytoband object and their data types:
data type: string
data type: long
data type: string
Note: Although you can also use the corresponding setter methods to set the attribute values, it is not recommended to do so unless you absolutely have to change the object's attributes.
The following are all the objects that are associated with the Cytoband:
Many to one assoication, use getPhysicalLocation
to get the associated PhysicalLocation.
CaCORE::CaBIO::CytogeneticLocation - Perl extension for CytogeneticLocation.
The CaCORE::CaBIO::CytogeneticLocation is a Perl object representation of the CaCORE CytogeneticLocation object.
CytogeneticLocation extends from domain object Location.
See the CaCORE::ApplicationService manpage.
The following are all the attributes of the CytogeneticLocation object and their data types:
data type: string
data type: long
data type: long
Note: Although you can also use the corresponding setter methods to set the attribute values, it is not recommended to do so unless you absolutely have to change the object's attributes.
The following are all the objects that are associated with the CytogeneticLocation:
Many to one assoication, use getEndCytoband
to get the associated EndCytoband.
Many to one assoication, use getStartCytoband
to get the associated StartCytoband.
CaCORE::CaBIO::DiseaseOntology - Perl extension for DiseaseOntology.
The CaCORE::CaBIO::DiseaseOntology is a Perl object representation of the CaCORE DiseaseOntology object.
See the CaCORE::ApplicationService manpage.
The following are all the attributes of the DiseaseOntology object and their data types:
data type: string
data type: long
data type: string
Note: Although you can also use the corresponding setter methods to set the attribute values, it is not recommended to do so unless you absolutely have to change the object's attributes.
The following are all the objects that are associated with the DiseaseOntology:
One to many assoication, use getChildDiseaseOntologyRelationshipCollection
to get a collection of associated ChildDiseaseOntologyRelationship.
One to many assoication, use getClinicalTrialProtocolCollection
to get a collection of associated ClinicalTrialProtocol.
One to many assoication, use getHistopathologyCollection
to get a collection of associated Histopathology.
One to many assoication, use getParentDiseaseOntologyRelationshipCollection
to get a collection of associated ParentDiseaseOntologyRelationship.
CaCORE::CaBIO::DiseaseOntologyRelationship - Perl extension for DiseaseOntologyRelationship.
The CaCORE::CaBIO::DiseaseOntologyRelationship is a Perl object representation of the CaCORE DiseaseOntologyRelationship object.
See the CaCORE::ApplicationService manpage.
The following are all the attributes of the DiseaseOntologyRelationship object and their data types:
data type: string
data type: long
data type: string
Note: Although you can also use the corresponding setter methods to set the attribute values, it is not recommended to do so unless you absolutely have to change the object's attributes.
The following are all the objects that are associated with the DiseaseOntologyRelationship:
Many to one assoication, use getChildDiseaseOntology
to get the associated ChildDiseaseOntology.
Many to one assoication, use getParentDiseaseOntology
to get the associated ParentDiseaseOntology.
CaCORE::CaBIO::Gene - Perl extension for Gene.
The CaCORE::CaBIO::Gene is a Perl object representation of the CaCORE Gene object.
See the CaCORE::ApplicationService manpage.
The following are all the attributes of the Gene object and their data types:
data type: string
data type: long
data type: string
data type: long
data type: string
Note: Although you can also use the corresponding setter methods to set the attribute values, it is not recommended to do so unless you absolutely have to change the object's attributes.
The following are all the objects that are associated with the Gene:
Many to one assoication, use getChromosome
to get the associated Chromosome.
One to many assoication, use getDatabaseCrossReferenceCollection
to get a collection of associated DatabaseCrossReference.
One to many assoication, use getGeneAliasCollection
to get a collection of associated GeneAlias.
One to many assoication, use getGeneOntologyCollection
to get a collection of associated GeneOntology.
One to many assoication, use getGeneRelativeLocationCollection
to get a collection of associated GeneRelativeLocation.
One to many assoication, use getGenericReporterCollection
to get a collection of associated GenericReporter.
One to many assoication, use getHistopathologyCollection
to get a collection of associated Histopathology.
One to many assoication, use getHomologousAssociationCollection
to get a collection of associated HomologousAssociation.
One to many assoication, use getLibraryCollection
to get a collection of associated Library.
One to many assoication, use getLocationCollection
to get a collection of associated Location.
One to many assoication, use getNucleicAcidSequenceCollection
to get a collection of associated NucleicAcidSequence.
One to many assoication, use getOrganOntologyCollection
to get a collection of associated OrganOntology.
One to many assoication, use getPathwayCollection
to get a collection of associated Pathway.
One to many assoication, use getProteinCollection
to get a collection of associated Protein.
One to many assoication, use getTargetCollection
to get a collection of associated Target.
Many to one assoication, use getTaxon
to get the associated Taxon.
CaCORE::CaBIO::GeneAlias - Perl extension for GeneAlias.
The CaCORE::CaBIO::GeneAlias is a Perl object representation of the CaCORE GeneAlias object.
See the CaCORE::ApplicationService manpage.
The following are all the attributes of the GeneAlias object and their data types:
data type: string
data type: long
data type: string
data type: string
Note: Although you can also use the corresponding setter methods to set the attribute values, it is not recommended to do so unless you absolutely have to change the object's attributes.
The following are all the objects that are associated with the GeneAlias:
One to many assoication, use getGeneCollection
to get a collection of associated Gene.
CaCORE::CaBIO::GeneOntology - Perl extension for GeneOntology.
The CaCORE::CaBIO::GeneOntology is a Perl object representation of the CaCORE GeneOntology object.
See the CaCORE::ApplicationService manpage.
The following are all the attributes of the GeneOntology object and their data types:
data type: string
data type: long
data type: string
Note: Although you can also use the corresponding setter methods to set the attribute values, it is not recommended to do so unless you absolutely have to change the object's attributes.
The following are all the objects that are associated with the GeneOntology:
One to many assoication, use getChildGeneOntologyRelationshipCollection
to get a collection of associated ChildGeneOntologyRelationship.
One to many assoication, use getGeneCollection
to get a collection of associated Gene.
One to many assoication, use getParentGeneOntologyRelationshipCollection
to get a collection of associated ParentGeneOntologyRelationship.
CaCORE::CaBIO::GeneOntologyRelationship - Perl extension for GeneOntologyRelationship.
The CaCORE::CaBIO::GeneOntologyRelationship is a Perl object representation of the CaCORE GeneOntologyRelationship object.
See the CaCORE::ApplicationService manpage.
The following are all the attributes of the GeneOntologyRelationship object and their data types:
data type: string
data type: long
data type: string
Note: Although you can also use the corresponding setter methods to set the attribute values, it is not recommended to do so unless you absolutely have to change the object's attributes.
The following are all the objects that are associated with the GeneOntologyRelationship:
Many to one assoication, use getChildGeneOntology
to get the associated ChildGeneOntology.
Many to one assoication, use getParentGeneOntology
to get the associated ParentGeneOntology.
CaCORE::CaBIO::GeneRelativeLocation - Perl extension for GeneRelativeLocation.
The CaCORE::CaBIO::GeneRelativeLocation is a Perl object representation of the CaCORE GeneRelativeLocation object.
See the CaCORE::ApplicationService manpage.
The following are all the attributes of the GeneRelativeLocation object and their data types:
data type: string
data type: long
data type: string
Note: Although you can also use the corresponding setter methods to set the attribute values, it is not recommended to do so unless you absolutely have to change the object's attributes.
The following are all the objects that are associated with the GeneRelativeLocation:
CaCORE::CaBIO::GenericArray - Perl extension for GenericArray.
The CaCORE::CaBIO::GenericArray is a Perl object representation of the CaCORE GenericArray object.
See the CaCORE::ApplicationService manpage.
The following are all the attributes of the GenericArray object and their data types:
data type: string
data type: string
data type: long
data type: string
data type: string
Note: Although you can also use the corresponding setter methods to set the attribute values, it is not recommended to do so unless you absolutely have to change the object's attributes.
The following are all the objects that are associated with the GenericArray:
One to many assoication, use getGenericReporterCollection
to get a collection of associated GenericReporter.
CaCORE::CaBIO::GenericReporter - Perl extension for GenericReporter.
The CaCORE::CaBIO::GenericReporter is a Perl object representation of the CaCORE GenericReporter object.
See the CaCORE::ApplicationService manpage.
The following are all the attributes of the GenericReporter object and their data types:
data type: string
data type: long
data type: string
data type: string
Note: Although you can also use the corresponding setter methods to set the attribute values, it is not recommended to do so unless you absolutely have to change the object's attributes.
The following are all the objects that are associated with the GenericReporter:
Many to one assoication, use getGene
to get the associated Gene.
One to many assoication, use getGenericArrayCollection
to get a collection of associated GenericArray.
CaCORE::CaBIO::Histopathology - Perl extension for Histopathology.
The CaCORE::CaBIO::Histopathology is a Perl object representation of the CaCORE Histopathology object.
See the CaCORE::ApplicationService manpage.
The following are all the attributes of the Histopathology object and their data types:
data type: string
data type: string
data type: string
data type: long
data type: string
data type: string
data type: string
data type: float
Note: Although you can also use the corresponding setter methods to set the attribute values, it is not recommended to do so unless you absolutely have to change the object's attributes.
The following are all the objects that are associated with the Histopathology:
One to many assoication, use getAnomalyCollection
to get a collection of associated Anomaly.
One to many assoication, use getClinicalTrialProtocolCollection
to get a collection of associated ClinicalTrialProtocol.
Many to one assoication, use getDiseaseOntology
to get the associated DiseaseOntology.
One to many assoication, use getGeneCollection
to get a collection of associated Gene.
One to many assoication, use getLibraryCollection
to get a collection of associated Library.
One to many assoication, use getMetastasisCollection
to get a collection of associated Metastasis.
Many to one assoication, use getOrganOntology
to get the associated OrganOntology.
CaCORE::CaBIO::HomologousAssociation - Perl extension for HomologousAssociation.
The CaCORE::CaBIO::HomologousAssociation is a Perl object representation of the CaCORE HomologousAssociation object.
See the CaCORE::ApplicationService manpage.
The following are all the attributes of the HomologousAssociation object and their data types:
data type: string
data type: long
data type: long
data type: float
Note: Although you can also use the corresponding setter methods to set the attribute values, it is not recommended to do so unless you absolutely have to change the object's attributes.
The following are all the objects that are associated with the HomologousAssociation:
Many to one assoication, use getHomologousGene
to get the associated HomologousGene.
CaCORE::CaBIO::Library - Perl extension for Library.
The CaCORE::CaBIO::Library is a Perl object representation of the CaCORE Library object.
See the CaCORE::ApplicationService manpage.
The following are all the attributes of the Library object and their data types:
data type: string
data type: string
data type: string
data type: string
data type: long
data type: dateTime
data type: string
data type: long
data type: string
data type: string
data type: string
data type: string
data type: string
data type: long
data type: string
data type: long
Note: Although you can also use the corresponding setter methods to set the attribute values, it is not recommended to do so unless you absolutely have to change the object's attributes.
The following are all the objects that are associated with the Library:
One to many assoication, use getCloneCollection
to get a collection of associated Clone.
One to many assoication, use getGeneCollection
to get a collection of associated Gene.
One to many assoication, use getHistopathologyCollection
to get a collection of associated Histopathology.
Many to one assoication, use getProtocol
to get the associated Protocol.
Many to one assoication, use getTissue
to get the associated Tissue.
CaCORE::CaBIO::Location - Perl extension for Location.
The CaCORE::CaBIO::Location is a Perl object representation of the CaCORE Location object.
See the CaCORE::ApplicationService manpage.
The following are all the attributes of the Location object and their data types:
data type: long
Note: Although you can also use the corresponding setter methods to set the attribute values, it is not recommended to do so unless you absolutely have to change the object's attributes.
The following are all the objects that are associated with the Location:
Many to one assoication, use getSNP
to get the associated SNP.
Many to one assoication, use getChromosome
to get the associated Chromosome.
Many to one assoication, use getGene
to get the associated Gene.
Many to one assoication, use getNucleicAcidSequence
to get the associated NucleicAcidSequence.
CaCORE::CaBIO::NucleicAcidSequence - Perl extension for NucleicAcidSequence.
The CaCORE::CaBIO::NucleicAcidSequence is a Perl object representation of the CaCORE NucleicAcidSequence object.
See the CaCORE::ApplicationService manpage.
The following are all the attributes of the NucleicAcidSequence object and their data types:
data type: string
data type: string
data type: string
data type: long
data type: long
data type: string
data type: string
Note: Although you can also use the corresponding setter methods to set the attribute values, it is not recommended to do so unless you absolutely have to change the object's attributes.
The following are all the objects that are associated with the NucleicAcidSequence:
Many to one assoication, use getCloneRelativeLocation
to get the associated CloneRelativeLocation.
One to many assoication, use getDatabaseCrossReferenceCollection
to get a collection of associated DatabaseCrossReference.
One to many assoication, use getGeneCollection
to get a collection of associated Gene.
One to many assoication, use getLocationCollection
to get a collection of associated Location.
CaCORE::CaBIO::OrganOntology - Perl extension for OrganOntology.
The CaCORE::CaBIO::OrganOntology is a Perl object representation of the CaCORE OrganOntology object.
See the CaCORE::ApplicationService manpage.
The following are all the attributes of the OrganOntology object and their data types:
data type: string
data type: long
data type: string
Note: Although you can also use the corresponding setter methods to set the attribute values, it is not recommended to do so unless you absolutely have to change the object's attributes.
The following are all the objects that are associated with the OrganOntology:
One to many assoication, use getAnomalyCollection
to get a collection of associated Anomaly.
One to many assoication, use getChildOrganOntologyRelationshipCollection
to get a collection of associated ChildOrganOntologyRelationship.
One to many assoication, use getGeneCollection
to get a collection of associated Gene.
One to many assoication, use getHistopathologyCollection
to get a collection of associated Histopathology.
One to many assoication, use getParentOrganOntologyRelationshipCollection
to get a collection of associated ParentOrganOntologyRelationship.
CaCORE::CaBIO::OrganOntologyRelationship - Perl extension for OrganOntologyRelationship.
The CaCORE::CaBIO::OrganOntologyRelationship is a Perl object representation of the CaCORE OrganOntologyRelationship object.
See the CaCORE::ApplicationService manpage.
The following are all the attributes of the OrganOntologyRelationship object and their data types:
data type: string
data type: long
data type: string
Note: Although you can also use the corresponding setter methods to set the attribute values, it is not recommended to do so unless you absolutely have to change the object's attributes.
The following are all the objects that are associated with the OrganOntologyRelationship:
Many to one assoication, use getChildOrganOntology
to get the associated ChildOrganOntology.
Many to one assoication, use getParentOrganOntology
to get the associated ParentOrganOntology.
CaCORE::CaBIO::Pathway - Perl extension for Pathway.
The CaCORE::CaBIO::Pathway is a Perl object representation of the CaCORE Pathway object.
See the CaCORE::ApplicationService manpage.
The following are all the attributes of the Pathway object and their data types:
data type: string
data type: string
data type: string
data type: string
data type: long
data type: string
Note: Although you can also use the corresponding setter methods to set the attribute values, it is not recommended to do so unless you absolutely have to change the object's attributes.
The following are all the objects that are associated with the Pathway:
One to many assoication, use getGeneCollection
to get a collection of associated Gene.
One to many assoication, use getHistopathologyCollection
to get a collection of associated Histopathology.
Many to one assoication, use getTaxon
to get the associated Taxon.
CaCORE::CaBIO::PhysicalLocation - Perl extension for PhysicalLocation.
The CaCORE::CaBIO::PhysicalLocation is a Perl object representation of the CaCORE PhysicalLocation object.
PhysicalLocation extends from domain object Location.
See the CaCORE::ApplicationService manpage.
The following are all the attributes of the PhysicalLocation object and their data types:
data type: long
data type: long
Note: Although you can also use the corresponding setter methods to set the attribute values, it is not recommended to do so unless you absolutely have to change the object's attributes.
The following are all the objects that are associated with the PhysicalLocation:
One to many assoication, use getCytobandCollection
to get a collection of associated Cytoband.
CaCORE::CaBIO::PopulationFrequency - Perl extension for PopulationFrequency.
The CaCORE::CaBIO::PopulationFrequency is a Perl object representation of the CaCORE PopulationFrequency object.
See the CaCORE::ApplicationService manpage.
The following are all the attributes of the PopulationFrequency object and their data types:
data type: string
data type: string
data type: long
data type: string
data type: double
data type: string
data type: double
data type: string
Note: Although you can also use the corresponding setter methods to set the attribute values, it is not recommended to do so unless you absolutely have to change the object's attributes.
The following are all the objects that are associated with the PopulationFrequency:
Many to one assoication, use getSNP
to get the associated SNP.
CaCORE::CaBIO::Protein - Perl extension for Protein.
The CaCORE::CaBIO::Protein is a Perl object representation of the CaCORE Protein object.
See the CaCORE::ApplicationService manpage.
The following are all the attributes of the Protein object and their data types:
data type: string
data type: string
data type: long
data type: string
data type: string
data type: string
Note: Although you can also use the corresponding setter methods to set the attribute values, it is not recommended to do so unless you absolutely have to change the object's attributes.
The following are all the objects that are associated with the Protein:
One to many assoication, use getGeneCollection
to get a collection of associated Gene.
One to many assoication, use getKeywordsCollection
to get a collection of associated Keywords.
One to many assoication, use getProteinAliasCollection
to get a collection of associated ProteinAlias.
Many to one assoication, use getProteinSequence
to get the associated ProteinSequence.
One to many assoication, use getSecondaryAccessionCollection
to get a collection of associated SecondaryAccession.
One to many assoication, use getTaxonCollection
to get a collection of associated Taxon.
CaCORE::CaBIO::ProteinAlias - Perl extension for ProteinAlias.
The CaCORE::CaBIO::ProteinAlias is a Perl object representation of the CaCORE ProteinAlias object.
See the CaCORE::ApplicationService manpage.
The following are all the attributes of the ProteinAlias object and their data types:
data type: string
data type: long
data type: string
Note: Although you can also use the corresponding setter methods to set the attribute values, it is not recommended to do so unless you absolutely have to change the object's attributes.
The following are all the objects that are associated with the ProteinAlias:
One to many assoication, use getProteinCollection
to get a collection of associated Protein.
CaCORE::CaBIO::ProteinSequence - Perl extension for ProteinSequence.
The CaCORE::CaBIO::ProteinSequence is a Perl object representation of the CaCORE ProteinSequence object.
See the CaCORE::ApplicationService manpage.
The following are all the attributes of the ProteinSequence object and their data types:
data type: string
data type: string
data type: long
data type: long
data type: double
data type: string
Note: Although you can also use the corresponding setter methods to set the attribute values, it is not recommended to do so unless you absolutely have to change the object's attributes.
The following are all the objects that are associated with the ProteinSequence:
Many to one assoication, use getProtein
to get the associated Protein.
CaCORE::CaBIO::Protocol - Perl extension for Protocol.
The CaCORE::CaBIO::Protocol is a Perl object representation of the CaCORE Protocol object.
See the CaCORE::ApplicationService manpage.
The following are all the attributes of the Protocol object and their data types:
data type: string
data type: string
data type: long
data type: string
data type: string
Note: Although you can also use the corresponding setter methods to set the attribute values, it is not recommended to do so unless you absolutely have to change the object's attributes.
The following are all the objects that are associated with the Protocol:
One to many assoication, use getLibraryCollection
to get a collection of associated Library.
One to many assoication, use getTissueCollection
to get a collection of associated Tissue.
CaCORE::CaBIO::ProtocolAssociation - Perl extension for ProtocolAssociation.
The CaCORE::CaBIO::ProtocolAssociation is a Perl object representation of the CaCORE ProtocolAssociation object.
See the CaCORE::ApplicationService manpage.
The following are all the attributes of the ProtocolAssociation object and their data types:
data type: string
data type: long
data type: string
data type: string
data type: string
data type: long
Note: Although you can also use the corresponding setter methods to set the attribute values, it is not recommended to do so unless you absolutely have to change the object's attributes.
The following are all the objects that are associated with the ProtocolAssociation:
Many to one assoication, use getClinicalTrialProtocol
to get the associated ClinicalTrialProtocol.
Many to one assoication, use getDiseaseOntology
to get the associated DiseaseOntology.
CaCORE::CaBIO::SNP - Perl extension for SNP.
The CaCORE::CaBIO::SNP is a Perl object representation of the CaCORE SNP object.
See the CaCORE::ApplicationService manpage.
The following are all the attributes of the SNP object and their data types:
data type: string
data type: string
data type: string
data type: string
data type: long
data type: string
Note: Although you can also use the corresponding setter methods to set the attribute values, it is not recommended to do so unless you absolutely have to change the object's attributes.
The following are all the objects that are associated with the SNP:
One to many assoication, use getDatabaseCrossReferenceCollection
to get a collection of associated DatabaseCrossReference.
One to many assoication, use getGeneRelativeLocationCollection
to get a collection of associated GeneRelativeLocation.
One to many assoication, use getLocationCollection
to get a collection of associated Location.
One to many assoication, use getPopulationFrequencyCollection
to get a collection of associated PopulationFrequency.
CaCORE::CaBIO::Target - Perl extension for Target.
The CaCORE::CaBIO::Target is a Perl object representation of the CaCORE Target object.
See the CaCORE::ApplicationService manpage.
The following are all the attributes of the Target object and their data types:
data type: string
data type: long
data type: string
data type: string
Note: Although you can also use the corresponding setter methods to set the attribute values, it is not recommended to do so unless you absolutely have to change the object's attributes.
The following are all the objects that are associated with the Target:
One to many assoication, use getAgentCollection
to get a collection of associated Agent.
One to many assoication, use getAnomalyCollection
to get a collection of associated Anomaly.
One to many assoication, use getGeneCollection
to get a collection of associated Gene.
CaCORE::CaBIO::Taxon - Perl extension for Taxon.
The CaCORE::CaBIO::Taxon is a Perl object representation of the CaCORE Taxon object.
See the CaCORE::ApplicationService manpage.
The following are all the attributes of the Taxon object and their data types:
data type: string
data type: string
data type: string
data type: string
data type: long
data type: string
Note: Although you can also use the corresponding setter methods to set the attribute values, it is not recommended to do so unless you absolutely have to change the object's attributes.
The following are all the objects that are associated with the Taxon:
One to many assoication, use getChromosomeCollection
to get a collection of associated Chromosome.
One to many assoication, use getCloneCollection
to get a collection of associated Clone.
One to many assoication, use getGeneCollection
to get a collection of associated Gene.
One to many assoication, use getPathwayCollection
to get a collection of associated Pathway.
One to many assoication, use getProteinCollection
to get a collection of associated Protein.
One to many assoication, use getTissueCollection
to get a collection of associated Tissue.
CaCORE::CaBIO::Tissue - Perl extension for Tissue.
The CaCORE::CaBIO::Tissue is a Perl object representation of the CaCORE Tissue object.
See the CaCORE::ApplicationService manpage.
The following are all the attributes of the Tissue object and their data types:
data type: string
data type: string
data type: string
data type: string
data type: string
data type: long
data type: string
data type: string
data type: string
data type: string
data type: string
Note: Although you can also use the corresponding setter methods to set the attribute values, it is not recommended to do so unless you absolutely have to change the object's attributes.
The following are all the objects that are associated with the Tissue:
One to many assoication, use getLibraryCollection
to get a collection of associated Library.
Many to one assoication, use getProtocol
to get the associated Protocol.
Many to one assoication, use getTaxon
to get the associated Taxon.
CaCORE::CaBIO::Vocabulary - Perl extension for Vocabulary.
The CaCORE::CaBIO::Vocabulary is a Perl object representation of the CaCORE Vocabulary object.
See the CaCORE::ApplicationService manpage.
The following are all the attributes of the Vocabulary object and their data types:
data type: string
data type: string
data type: string
data type: long
Note: Although you can also use the corresponding setter methods to set the attribute values, it is not recommended to do so unless you absolutely have to change the object's attributes.
The following are all the objects that are associated with the Vocabulary:
One to many assoication, use getAnomalyCollection
to get a collection of associated Anomaly.
Please do not contact author directly. Send email to ncicb@pop.nci.nih.gov to request support or report a bug.
Shan Jiang <jiangs@mail.nih.gov>
The CaCORE Software License, Version 1.0
Copyright 2001-2005 SAIC. This software was developed in conjunction with the National Cancer Institute, and so to the extent government employees are co-authors, any rights in such works shall be subject to Title 17 of the United States Code, section 105. Redistribution and use in source and binary forms, with or without modification, are permitted provided that the following conditions are met:
Redistributions of source code must retain the above copyright notice, this list of conditions and the disclaimer of Article 5, below. Redistributions in binary form must reproduce the above copyright notice, this list of conditions and the disclaimer of Article 5 in the documentation and/or other materials provided with the distribution.
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