spkPair               package:spkTools               R Documentation

_P_a_i_r_w_i_s_e _C_o_m_p_a_r_i_s_o_n_s _f_o_r _S_p_i_k_e-_i_n _G_e_n_e_s

_D_e_s_c_r_i_p_t_i_o_n:

     Compute log-ratios among spike-in genes.

_U_s_a_g_e:

     spkPair(object)

_A_r_g_u_m_e_n_t_s:

  object: a SpikeInExpressionSet object

_V_a_l_u_e:

     An array containing either log-ratios (M), average log expression
     (A), and nominal concentrations (N1 & N2). Dimension one is genes,
     dimension two is array pairings, dimension three is M, A, N1, and
     N2.

_A_u_t_h_o_r(_s):

     Matthew N. McCall

_E_x_a_m_p_l_e_s:

     data(affy)
     affyPair <- spkPair(affy)

