MAT                   package:rMAT                   R Documentation

_T_h_i_s _o_b_j_e_c_t _c_o_n_t_a_i_n_s _a_n _E_x_p_r_e_s_s_i_o_n_S_e_t

_D_e_s_c_r_i_p_t_i_o_n:

     An object summarizing the output from the MAT function with the
     following slots :
     genomeName,featurePosition,featureChromosome,score,regIndex,method,threshold

_U_s_a_g_e:

             
     NewMAT<-new('MAT', genomeName="Sc", featurePosition, featureChromosome, score, regIndex, method, threshold)

_A_u_t_h_o_r(_s):

     Charles Cheung, cykc@interchange.ubc.ca and Raphael Gottardo,
     raphael.gottardo@ircm.qc.ca Arnaud Droit, arnaud.droit@ircm.qc.ca

_R_e_f_e_r_e_n_c_e_s:

     Lo, K., Brinkman, R. R. and Gottardo, R. (2008) Automated Gating
     of Flow Cytometry Data via Robust Model-based Clustering.
     _Cytometry A_ *73*, 321-332.

_S_e_e _A_l_s_o:

     'tilingSet'

_E_x_a_m_p_l_e_s:

             
     #       genomeName="Sc03b_MR_v04"
     #       featurePosition="4"
     #       featureChromosome="chr1"
     #       score="8.8623"
     #       regIndex="177"
     #       method=""
     #       threshold="5"

     #NewMAT<-new('MAT', genomeName="Sc", featurePosition, featureChromosome, score, regIndex, method, threshold)
             

