Package: rMAT
Type: Package
Title: R implementation from MAT program to normalize and analyze
        tiling arrays and ChIP-chip data.
Version: 1.1.2
Author: Charles Cheung and Arnaud Droit and Raphael Gottardo
Maintainer: Arnaud Droit <arnaud.droit@ircm.qc.ca> and Raphael Gottardo
        <raphael.gottardo@ircm.qc.ca>
Description: This package is an R version of the package MAT and
        contains functions to parse and merge Affymetrix BPMAP and CEL
        tiling array files (using C++ based Fusion SDK and Bioconductor
        package affxparser), normalize tiling arrays using sequence
        specific models, detect enriched regions from ChIP-chip
        experiments. Note: users should have GSL anf GenomeGraphs
        installed. Windows users: 'consult the README file available in
        the inst directory of the source distribution for necessary
        configuration instructions'.
Note: test.
Year: 2009.
License: Artistic-2.0
Imports: Biobase,affxparser,methods
Suggests: GenomeGraphs
biocViews: Microarray, Preprocessing, Statistics
URL: http://www.rglab.org
Packaged: 2009-04-29 10:48:02 UTC; biocbuild
Built: R 2.9.0; i386-pc-mingw32; 2009-04-29 14:10:41 UTC; windows
