SnpCallSet-class        package:oligoClasses        R Documentation

"_S_n_p_S_e_t" _E_x_t_e_n_s_i_o_n_s

_D_e_s_c_r_i_p_t_i_o_n:

     Class to store genotype calls / copy number estimates (and
     confidences) obtained via SNP arrays.

_O_b_j_e_c_t_s _f_r_o_m _t_h_e _C_l_a_s_s:

     Objects can be created by calls of the form 'new("SnpCallSet",
     assayData, featureData, phenoData, experimentData, annotation,
     calls, callsConfidence, ...)'.

_S_l_o_t_s:


     '_a_s_s_a_y_D_a_t_a': Object of class '"AssayData"'  

     '_p_h_e_n_o_D_a_t_a': Object of class '"AnnotatedDataFrame"'  

     '_f_e_a_t_u_r_e_D_a_t_a': Object of class '"AnnotatedDataFrame"'  

     '_e_x_p_e_r_i_m_e_n_t_D_a_t_a': Object of class '"MIAME"'  

     '_a_n_n_o_t_a_t_i_o_n': Object of class '"character"'  

     '.___c_l_a_s_s_V_e_r_s_i_o_n__': Object of class '"Versions"'  

_E_x_t_e_n_d_s:

     Class 'eSet', directly. Class 'VersionedBiobase', by class "eSet",
     distance 2. Class 'Versioned', by class "eSet", distance 3.

_M_e_t_h_o_d_s:

     No methods defined with class "SnpCallSet" in the signature.

_S_e_e _A_l_s_o:

     'eSet', 'VersionedBiobase', 'Versioned'

