Entry: collectSummaryFlowInfo
Aliases: collectSummaryFlowInfo collectSummaryFlowInfo,flowJoList-method fcsSummary-class fcsSummaryList-class
Keywords: methods
Description: Collect Population Statistics on Flow Files
URL: ../../../library/flowFlowJo/html/collectSummaryFlowInfo.html

Entry: createFlowReport
Aliases: createFlowReport createFlowReport,fcsSummaryList-method
Keywords: methods list
Description: Produce a denormalized data frame of summary statistics and other information on a set of FlowJo gated FCS files
URL: ../../../library/flowFlowJo/html/createFlowReport.html

Entry: flowFlowJo-package
Aliases: flowFlowJo-package flowFlowJo
Keywords: 
Description: Turn FlowJo workspaces into flowCore compliant objects
URL: ../../../library/flowFlowJo/html/flowFlowJo-package.html

Entry: flowJoCompensate-methods
Aliases: flowJoCompensate flowJoCompensate-methods flowJoCompensate,flowFrame,matrix-method flowJoCompensate,flowSet,matrix-method
Keywords: methods
Description: Compensate flow cytometry data the same way as FlowJo does
URL: ../../../library/flowFlowJo/html/flowJoCompensate-methods.html

Entry: getFlowJoGates
Aliases: getFlowJoGates getFlowJoGates,flowJoObj-method getFlowJoGates,flowJoList-method getFlowJoGates,flowJoObj,character-method getFlowJoGates,flowJoList,character-method
Keywords: 
Description: getFlowJoGates
URL: ../../../library/flowFlowJo/html/getFlowJoGates.html

Entry: getFlowJoSummary
Aliases: getFlowJoSummary
Keywords: 
Description: Summarize FlowJo Workspaces
URL: ../../../library/flowFlowJo/html/getFlowJoSummary.html

Entry: readFlowJoList
Aliases: readFlowJoList readFlowJoFile readFlowJoFile,character-method flowJoList-class flowJoObj-class gateNodeToFilterObject gateNodeToFilterObject,XMLInternalElementNode-method gatherFlowJoTransformations gatherFlowJoTransformations,XMLInternalDocument-method gatherFlowJoGates gatherFlowJoGates,XMLInternalDocument-method getFlowJoCompMatrix getFlowJoCompMatrix,XMLInternalDocument-method getFlowJoVersion getFlowJoVersion,XMLInternalDocument-method getWellId getWellId,flowFrame-method
Keywords: methods list
Description: Parse one or more FlowJo workspaces
URL: ../../../library/flowFlowJo/html/readFlowJoList.html

Entry: simplifyGateNames
Aliases: simplifyGateNames simplifyGateNames,character-method simplifyGateNames,filter-method
Keywords: methods list
Description: Standardize flow cytometry gate names
URL: ../../../library/flowFlowJo/html/simplifyGateNames.html
