splitIntoGroupsPseudo         package:edgeR         R Documentation

_S_p_l_i_t _p_s_e_u_d_o_d_a_t_a _a_c_c_o_r_d_i_n_g _t_o _g_r_o_u_p

_D_e_s_c_r_i_p_t_i_o_n:

     Given a pair of groups, split pseudodata for these groups

_U_s_a_g_e:

      
     splitIntoGroupsPseudo(pseudo, group, pair)

_A_r_g_u_m_e_n_t_s:

  pseudo: data matrix to be split (e.g. quantile adjusted pseudodata)

   group: group indicator, must be same length as ncol(pseudo)

    pair: pair of groups to be split from the data

_V_a_l_u_e:

     list in which each element is a matrix of count data for an
     individual group

_A_u_t_h_o_r(_s):

     Davis McCarthy

_E_x_a_m_p_l_e_s:

     # generate raw data from NB, create list object
     y<-matrix(rnbinom(80,size=1,mu=10),nrow=20)
     d<-DGEList(data=y,group=rep(1:2,each=2),lib.size=rep(c(1000:1001),2))
     rownames(d$data)<-paste("tagno",1:nrow(d$data),sep=".")
     z<-splitIntoGroupsPseudo(d$data,d$group,pair=c(1,2))

