KEGGPathwayInfo-class       package:KEGGgraph       R Documentation

_C_l_a_s_s "_K_E_G_G_P_a_t_h_w_a_y_I_n_f_o"

_D_e_s_c_r_i_p_t_i_o_n:

     A class to represent information of a KEGG pathway

_O_b_j_e_c_t_s _f_r_o_m _t_h_e _C_l_a_s_s:

     Objects can be created by calls of the function
     'parsePathwayInfo'.

_S_l_o_t_s:


     '_n_a_m_e': Object of class '"character"' Pathway name

     '_o_r_g': Object of class '"character"' Organism 

     '_n_u_m_b_e_r': Object of class '"character"' Number 

     '_t_i_t_l_e': Object of class '"character"' Title of the pathway

     '_i_m_a_g_e': Object of class '"character"' Image URL 

     '_l_i_n_k': Object of class '"character"' URL Link 

_M_e_t_h_o_d_s:


     _g_e_t_T_i_t_l_e 'signature(object = "KEGGPathwayInfo")': get title of the
          pathway

     _s_h_o_w 'signature(object = "KEGGPathwayInfo")': show method

_A_u_t_h_o_r(_s):

     Jitao David Zhang <URL: mailto:j.zhang@dkfz.de>

_R_e_f_e_r_e_n_c_e_s:

     KGML Document Manual <URL: http://www.genome.jp/kegg/docs/xml/>

_E_x_a_m_p_l_e_s:

     sfile <- system.file("extdata/hsa04010.xml",package="KEGGgraph")
     pathway <- parseKGML(sfile)
     pi <- getPathwayInfo(pathway)

     class(pi)

     getTitle(pi)

