
import(tools, AnnotationDbi, annaffy)

importFrom("graphics", "plot")
importClassesFrom("IRanges", "RangedData")

exportClasses(phaseInput, hbTestResults, chunksize, aafSNP)

exportMethods(gwSnpTests, plot, topSnps, coerce, 
   invokePhase, residTests, hbTests, pvals, locs, hscores)

export(snpm2phase, personalHap,
 parsePh.out, snpm2mapLD, masterSnps, chunksize,
 cisSnpTests, aafSNP) #, phaseHS)
