showDiscreteValues            package:DFP            R Documentation

_P_r_i_n_t_s _t_h_e _l_a_b_e_l_s _t_o _w_h_i_c_h _t_h_e _a_l_g_o_r_i_t_h_m _c_o_n_v_e_r_t_s _t_h_e _g_e_n_e _e_x_p_r_e_s_s_i_o_n _v_a_l_u_e_s

_D_e_s_c_r_i_p_t_i_o_n:

     In an intermediate step, the algorithm 'discriminantFuzzyPattern' 
     converts the gene expression values into discrete labels
     (combining Low, Medium and High,  depending on the value of
     the param overlapping).
      This function permits printing these labels, specifying a set of
     genes (a vector) and/or classes of samples.

_U_s_a_g_e:

       showDiscreteValues(dvs, genes, classes)

_A_r_g_u_m_e_n_t_s:

     dvs: A matrix with discrete labels for a set of genes (in rows) of
          several samples (in columns). 

   genes: [optional] The set of genes to plot. 

 classes: [optional] A set of classes to which the samples belong. It
          must be one of the classes stored in the  phenoData of the
          original 'ExpressionSet' object. 

_V_a_l_u_e:

     A subset of the matrix 'dvs' determined by the restrictions
     ('genes' and/or 'classes').

_A_u_t_h_o_r(_s):

     Rodrigo Alvarez-Gonzalez
      Daniel Glez-Pena
      Fernando Diaz
      Florentino Fdez-Riverola
      Maintainer: Rodrigo Alvarez-Gonzalez <rodrigo.djv@uvigo.es>

_R_e_f_e_r_e_n_c_e_s:

     F. Diaz; F. Fdez-Riverola; D. Glez-Pena; J.M. Corchado. Using
     Fuzzy Patterns for Gene Selection and Data Reduction on Microarray
     Data. 7th International Conference on Intelligent Data Engineering
     and Automated Learning: IDEAL 2006, (2006) pp. 1095-1102

