genomeSequence-methods      package:rtracklayer      R Documentation

_R_e_t_r_i_e_v_i_n_g _a _g_e_n_o_m_e _s_e_q_u_e_n_c_e

_D_e_s_c_r_i_p_t_i_o_n:

     Methods for retrieving the sequence of a 'genomeSegment' from an
     object.

_M_e_t_h_o_d_s:

     The following methods are defined by 'rtracklayer' for
     'genomeSequence(object, segment = genomeSegment(object), ...)'.

     _o_b_j_e_c_t = "_u_c_s_c_S_e_s_s_i_o_n" 'genomeSequence(object, segment =
          genomeSegment(object), track = "Assembly")': Gets the
          sequence in 'segment' and 'track' from the session. 


     _o_b_j_e_c_t = "_a_r_g_o_S_e_s_s_i_o_n" 'genomeSequence(object, segment)': Gets the
          sequence in 'segment' from the session.


_S_e_e _A_l_s_o:

     'laySequence' for storing sequences.

