setRealCN            package:beadarraySNP            R Documentation

_I_n_t_e_g_r_a_t_e _s_t_a_t_e _i_n_f_o_r_m_a_t_i_o_n _i_n_t_o _S_N_P _o_b_j_e_c_t

_D_e_s_c_r_i_p_t_i_o_n:

     Set calculated values of copy numbers in 'inferred' element of
     'AssayData' slot

_U_s_a_g_e:

     setRealCN(object, sample, cn.sum)

_A_r_g_u_m_e_n_t_s:

  object: class SnpSetIllumina 

  sample: sample identifier

  cn.sum: list, see 'createCNSummary'

_V_a_l_u_e:

     SnpSetIllumina object with 'inferred' element of 'AssayData' slot
     set

_A_u_t_h_o_r(_s):

     Jan Oosting

_S_e_e _A_l_s_o:

     'segmentate, alterCN, plotGoldenGate4OPA createCNSummary'

