0fa1083d854563f175d509cdf184cf1b *CITATION
8b28daf680239bb46a67e8dfce85b895 *CONTENTS
dc84530348eb33aed0e81affd1fb6d95 *DESCRIPTION
83d0ac3078744b44c6b58aedb9153e8d *INDEX
ad2125ba6f61d99e10fb181027411c21 *Meta/Rd.rds
0f2980c35804d3cd589fc07f75a5b5ce *Meta/data.rds
d440e62b00dc8161e92f4761406da14a *Meta/hsearch.rds
2f8f1954d8db800b5dd123e1b60764d0 *Meta/nsInfo.rds
d8f0bc349f7ed945676a4d258c7d7e85 *Meta/package.rds
7ac510867f75a12a7b8fc9c2c5c5f11f *Meta/vignette.rds
0de673832f842b70863cf74b8c763dc1 *NAMESPACE
6e3a353cb68c3865545e638b05502194 *R-ex/Rex.zip
f07d3015c4220dea7a7be8c741d2985b *R/VanillaICE
d0237ccb8dcb606fc7eaa864569d3dd0 *R/VanillaICE.rdb
d813624fe3ffaec2bc8d5d18851c176e *R/VanillaICE.rdx
7c3a5a5b12f23cc2f65f04f9c8258693 *affymetrix/calls.csv
1199214b4cc370031fc5ef5c64a14763 *affymetrix/callsConfidence.csv
49e403fc05d86a834fa89ff5a21c52f8 *affymetrix/cnConfidence.csv
80f2ca62180cbe3b387ce7f4c912ddbb *affymetrix/copyNumber.csv
6923fca9d0166fc71733855359ec7c34 *affymetrix/featureData.RData
7b0bcb7de3ff98109b55d65d3d5eb46a *affymetrix/phenoData.RData
cacd2e439dab918f6b9e52088580ad75 *chtml/VanillaICE.chm
8668288596c4d2117e8e70184286348b *data/Rdata.zip
cf56fa0d8daf71ce1fb535da65f33fd8 *data/filelist
ce7b06c1589b5d37ac130092a0dc8e9a *doc/IlluminaHowTo.R
575f5ebaefd74e0b557d02d95fcef00d *doc/IlluminaHowTo.Rnw
70073592fdf3aa808c21a0fa481d9a1d *doc/IlluminaHowTo.pdf
fa7334d8db12a2bc8b5e2b18147448c3 *doc/Rplots.pdf
7f59a76bb13ba171903e07c3d5ade2ba *doc/VanillaICE.R
ac84ebd4bee5005d1b512ed7a28ca5d6 *doc/VanillaICE.Rnw
7e6423f341dc0096e75175aba8a65476 *doc/VanillaICE.pdf
e25f2284c13cc8ff785c8fb5ab06ba1e *doc/ice.bib
fe7ea791a3ed916af93a4562d7c17291 *doc/index.html
6dac8ce0c3624baf4c85a5773c6910dc *help/AnIndex
fcac49104e4cc062a872e0d9fcdaca18 *help/Rhelp.zip
95c0bcf4c0db873d9f8981b09dee64ab *html/00Index.html
505f5e9fb81fb1cec66d44018f788ff4 *html/HmmOptions-class.html
30f842c2ed05e88c1afd1d61453655aa *html/HmmOptions-methods.html
e3cfa5bb60ca31205a51b320893832f8 *html/HmmParameter-class.html
6270649c4f810bcddc0e382ec3131287 *html/HmmPredict-class.html
77fbc3f20462e273ce38f15cd71fd711 *html/addFeatureData.html
5a327a70ee93856a18b2f8604d163bd6 *html/calculateBreakpoints.html
1852ce6815e675e1d8b9921aa675cd5e *html/calculateCnSE.html
1071744e3b6d8d624389fa4ffb3d992f *html/calculateDistance.html
fb3ab00b53a3e12e2e87b39e77e86c44 *html/calls.ICE.html
5b1e039d17c51af366ba72db2f75192f *html/calls.emission.html
88bbdad16b53a7c07d7f6e9322e82e2b *html/chromosome1.html
52eebf2a5a958433b790894c91fd0f1c *html/copyNumber.ICE.html
ce5c7339836cf8eff9e0ae9bcb57ef4d *html/copyNumber.emission.html
314431e3e0a7fd09e83974b96a85ee38 *html/copynumberEmission.html
a5fa4be0f777e88da127e28afdb7994e *html/emission.html
56bf9f95f5852af09a7a74f659f1b204 *html/findBreaks.html
2dc91fc57bc8ed8cdcca88f5b40e87a5 *html/fit.html
81649d5f72e46b09401229274d3b50f6 *html/genomicDistance.html
dda088ecf2f43528dbc77bd17afea8c0 *html/genotypeEmission.html
31f89a09eeaf648f65efc46a414dc493 *html/getChromosomeArm.html
281c7428e5b28d3870677194cff50061 *html/hmm.html
cc96f6815f9a24cb71518574cde429bb *html/pi.html
da70db18e5a4c9eebf114004bff35379 *html/scaleTransitionProbability.html
886f5710d570d38c914bb63f742bf4f2 *html/states.html
92a6fe247f83a6c71653e4265f039158 *html/transitionScale.html
23e186b8d58504b07e7004e237c7cb12 *html/viterbi.html
f6f762aa6c6fabd917216d7a503d4550 *illumina/illuminaEx.txt
8c5c6833a7c3dbca921ca17304edc97e *latex/Rhelp.zip
6bd8e2e70ac23a01ac1e0a31895759eb *libs/VanillaICE.dll
8172e84b4d24482cc1b6e5bf51f961fd *man/VanillaICE.Rd.gz
26635665f0643efe298913574309e677 *testing/hapmap100k.Rnw
adf2da95647e04835e22871b5b8591e9 *testing/hapmap6.Rnw
f9b793ab89e7d21d032c52d9f1213f0f *testing/hapmapTable.rda
