SGA                   package:SLGI                   R Documentation

_S_y_s_t_e_m_a_t_i_c _g_e_n_e_t_i_c _a_n_a_l_y_s_i_s _w_i_t_h _o_r_d_e_r_e_d _a_r_r_a_y_s _o_f _y_e_a_s_t _d_e_l_e_t_i_o_n.

_D_e_s_c_r_i_p_t_i_o_n:

     Listed of yeast deletion genes used as array probes in the
     Systematic Genetic Analysis (SGA) of yeast deletion Tong et. al.
     (2001).

_U_s_a_g_e:

            data(SGAraw)
            data(SGA)

_D_e_t_a_i_l_s:

     'SGAraw' is a 'character' vector of length 4672, corresponding to 
     the original yeast deletion genes set on the array. Note that some
     of those  genes correspond to ORFS that have subsequently been
     rejected.

     'SGA' is a 'character' vector of length 4655, corresponding to 
     the updated yeast deletion genes set on the array. The gene names
     have been updated from common gene name or alias to systemantic
     names (last update Feb. 2006).

_S_o_u_r_c_e:

     Table S1 from Tong et al . (2001) online supporting material.
     <URL:
     http://www.sciencemag.org/cgi/content/full/294/5550/2364/DC1>

_R_e_f_e_r_e_n_c_e_s:

     Systematic genetic analysis with ordered arrays of yeast deletion
     mutants, Tong et al, Science. Vol. 294, 2001

_E_x_a_m_p_l_e_s:

      data(SGAraw)
      length(SGAraw)

      if(require("YEAST"))
      updateSGA <- mget(SGAraw, YEASTCOMMON2SYSTEMATIC, ifnotfound = SGAraw)
      

