SDL                   package:SLGI                   R Documentation

_T_h_e _A_s_s_o_c_i_a_t_i_o_n _m_a_t_r_i_x _f_o_r _t_h_e _s_y_n_t_h_e_t_i_c _d_o_s_a_g_e
_l_e_t_h_a_l _s_c_r_e_e_n_s _i_n _Y_e_a_s_t.

_D_e_s_c_r_i_p_t_i_o_n:

     The data reported in Table 6 of the supplementary data of Measday
     et. al.

_U_s_a_g_e:

            data(SDL)
            data(SLchr)

_F_o_r_m_a_t:

     'SDL' is a matrix with 141 rows and 9 columns. The columns
     represent  3 genes at each of 3 temperatures (16, 25, 37 Celsius).
     The gene names and temperatures are  combined in the column names.
     The row names are yeast standard names. The values are 'NA', no
     effect, 'SDS' for synthetic dosage sick, 'SL' for synthetic lethal
     and 'SDL' for synthetic dosage lethal.

     'SLchr' is a matrix with 84 rows and 14 columns. Each column
     represents a query strain which was tested against the genome wide
     set of deletion strains. The entries can be 'NA' for no effect,
     'SL' for synthetic lethal and 'SS' for synthetic sick.

_S_o_u_r_c_e:

     Supplementary Table 6 of the reference given below.

_R_e_f_e_r_e_n_c_e_s:

     Systematic yeast synthetic lethal and synthetic dosage lethal
     screens identify genes required for chromosome segregation.
     Measday et al, PNAS, 2005, 13956-13961.

_E_x_a_m_p_l_e_s:

     data(SDL)
     table(SDL)

