Entry: cluster.sizestat
Aliases: cluster.sizestat
Keywords: utilities
Description: generate statistics on sizes of clusters
URL: ../../../library/ChemmineR/html/cluster.sizestat.html

Entry: cluster.visualize
Aliases: cluster.visualize
Keywords: utilities
Description: visualize clustering result using multi-dimensional scaling
URL: ../../../library/ChemmineR/html/cluster.visualize.html

Entry: cmp.cluster
Aliases: cmp.cluster
Keywords: utilities
Description: cluster compounds using a descriptor database
URL: ../../../library/ChemmineR/html/cmp.cluster.html

Entry: cmp.duplicated
Aliases: cmp.duplicated
Keywords: utilities
Description: quickly detect compound duplication in a descriptor database
URL: ../../../library/ChemmineR/html/cmp.duplicated.html

Entry: cmp.parse
Aliases: cmp.parse
Keywords: utilities
Description: Parse an SDF file and compute descriptors for all compounds
URL: ../../../library/ChemmineR/html/cmp.parse.html

Entry: cmp.parse1
Aliases: cmp.parse1
Keywords: utilities
Description: Parsing an SDF file and calculate the descriptor for one compound
URL: ../../../library/ChemmineR/html/cmp.parse1.html

Entry: cmp.search
Aliases: cmp.search
Keywords: utilities
Description: Search a descriptor database for compounds similar to query compound
URL: ../../../library/ChemmineR/html/cmp.search.html

Entry: cmp.similarity
Aliases: cmp.similarity
Keywords: utilities
Description: Compute similarity between two compounds using their descriptors
URL: ../../../library/ChemmineR/html/cmp.similarity.html

Entry: db.explain
Aliases: db.explain
Keywords: utilities
Description: Explain an atom-pair descriptor or an array of atom-pair descriptors
URL: ../../../library/ChemmineR/html/db.explain.html

Entry: db.subset
Aliases: db.subset
Keywords: utilities
Description: Subset a descriptor database and return a sub-database for the selected compounds
URL: ../../../library/ChemmineR/html/db.subset.html

Entry: sdf.subset
Aliases: sdf.subset
Keywords: utilities
Description: Subset a SDF and return SDF segements for selected compounds
URL: ../../../library/ChemmineR/html/sdf.subset.html

Entry: sdf.visualize
Aliases: sdf.visualize
Keywords: utilities
Description: Subset a SDF and visualize selected compounds in a webpage
URL: ../../../library/ChemmineR/html/sdf.visualize.html
