Entry: SAFE-class
Aliases: SAFE-class show,SAFE-method [,SAFE-method
Keywords: methods
Description: Class SAFE
URL: ../../../library/safe/html/SAFE-class.html

Entry: gene.results
Aliases: gene.results
Keywords: hplot
Description: Gene-specific results from SAFE
URL: ../../../library/safe/html/gene.results.html

Entry: getCmatrix
Aliases: getCmatrix
Keywords: htest
Description: Generation of a C matrix
URL: ../../../library/safe/html/getCmatrix.html

Entry: safe-internal
Aliases: local.t.Welch local.t.Student local.t.paired local.t.LM local.f.ANOVA local.f.GLM local.z.COXPH global.Wilcoxon global.Kolmogorov global.AveDiff global.Fisher global.Pearson error.FDR.YB error.FDR.BH error.FWER.WY error.FWER.Bonf error.FWER.Holm getPImatrix getAnnotateOptions getResamplingOptions getSAFEResults
Keywords: internal
Description: Internal SAFE functions
URL: ../../../library/safe/html/safe-internal.html

Entry: safe
Aliases: safe
Keywords: htest
Description: Significance Analysis of Function and Expression
URL: ../../../library/safe/html/safe.html

Entry: safedag
Aliases: safedag
Keywords: hplot
Description: SAFE results displayed in Gene Ontology
URL: ../../../library/safe/html/safedag.html

Entry: safeplot
Aliases: safeplot
Keywords: hplot
Description: SAFE plot
URL: ../../../library/safe/html/safeplot.html
