Subset,flowClust-method      package:flowClust      R Documentation

_S_u_b_s_e_t_t_i_n_g _D_a_t_a _B_a_s_e_d _o_n _C_l_u_s_t_e_r_i_n_g _R_e_s_u_l_t_s

_D_e_s_c_r_i_p_t_i_o_n:

     This method returns a subset of data upon the removal of outliers
     identified from the clustering (filtering) operations.

_U_s_a_g_e:

     ## S4 method for signature 'ANY, flowClust':
     Subset(x, subset, ...)

     ## S4 method for signature 'flowFrame, tmixFilterResult':
     Subset(x, subset, ...)

_A_r_g_u_m_e_n_t_s:

       x: A numeric vector, matrix, data frame of observations, or
          object of class 'flowFrame'.  This is the object on which
          'flowClust' or 'filter' was performed.

  subset: Object returned from 'flowClust' or 'filter'.

     ...: Further arguments to be passed to or from other methods.  The
          selection of columns can be done by specifying the optional
          'select' argument that takes a numeric (not supported when
          'x' is of class 'flowFrame') or character vector.

_V_a_l_u_e:

     An object which is a subset of 'x'.  It also retains the same
     class as 'x'.

_A_u_t_h_o_r(_s):

     Raphael Gottardo <raph@stat.ubc.ca>, Kenneth Lo <c.lo@stat.ubc.ca>

_R_e_f_e_r_e_n_c_e_s:

     Lo, K., Brinkman, R. R. and Gottardo, R. (2008) Automated Gating
     of Flow Cytometry Data via Robust Model-based Clustering.
     _Cytometry A_ *73*, 321-332.

_S_e_e _A_l_s_o:

     'split', 'flowClust', 'filter'

