27a6a2a26e2f80d9bf53cb2aa3344dbd *CITATION
464e33633cf025120a83ac07eefd7e00 *CONTENTS
aaf1ea8b80c80bdb591b5cd271e4f722 *COPYING
fcc7c34377e57104045e9c78bc853baf *DESCRIPTION
161d3ca1998a49c6dac0a71fd1aad520 *Exfiles/bfile
f3083394f38906926ddb0d2693df1fda *Exfiles/bgSeqs
3840aae4152530245dce6c6438b1c4dd *Exfiles/conFile
bd39ff76ae483c2077128270fa278270 *Exfiles/seq.fasta
a749e527ae282557dd37c639388747c4 *INDEX
2c101023db33ae4ede10a275e8b29fd8 *Meta/Rd.rds
297ebaf76797b19c38a0afdf847a148f *Meta/data.rds
df41512ffb5159215d564765dc928941 *Meta/hsearch.rds
fd318900ec29a6c8fd5a9a0dccd823c7 *Meta/nsInfo.rds
37791ba3a790a48440b21510f60e5da9 *Meta/package.rds
22560726b313a0aeb3db12401e525997 *Meta/vignette.rds
08e31b2057172171f308a7e90b230b5d *NAMESPACE
c2d8bf5e560ca9ebac81a2242b64fa71 *R-ex/Rex.zip
f07d3015c4220dea7a7be8c741d2985b *R/cosmo
3ffc5ee902cb2b468b76a4d5c2714d65 *R/cosmo.rdb
bfd2c558ab575505054be455a144243c *R/cosmo.rdx
f02a518c36c525767f66ccb4ee1cbfd7 *chtml/cosmo.chm
6e67765ca650196d943296aa3b672a3d *data/motifPWM.rda
88fa7285c38fab615571a3f0cd3ff177 *data/transMats.rda
edb224e6ef34770b106839e12601c03e *doc/Rplots.pdf
e156d89e2e31e6936a6554a971a8d801 *doc/cosmo.R
2c1884ad9d85b17925500b692e30728d *doc/cosmo.Rnw
11949ac8ce0535475ca3be55cf213f63 *doc/cosmo.pdf
68fa4d7ccac2e1596219146d0e756fe0 *doc/gui.png
362033b98910c4521c02a080bf9b5140 *doc/index.html
0bcbd56e14ee78ac11a3cc489d2f9422 *help/AnIndex
205415d6207b507c289324ca103a62ff *help/Rhelp.zip
5d7081d3e8349658985e3c23b80a909c *html/00Index.html
0e85a033c09f828f414ba22cf153ef5d *html/addCon.html
4c221a2a92f496e934c3176dd6a7a9dc *html/align-class.html
4e346442be150559c9bda61014a3481b *html/bfile2tmat.html
eb59163c01fe0b58ed88bac156746837 *html/bgModel.html
686a60da26df9cbd272e1c3076c1c5c2 *html/boundCon-class.html
f32272690400c6da65985a6b2e59af47 *html/constraintSet-class.html
e596bb74c61bf76d3d6aabf82875cc7b *html/cosmo-class.html
724a0f7674e5190165e0cedb9fce9f7f *html/cosmo.html
e0776589dca4518d9ac03447a1f1e2f8 *html/intInfo-class.html
9294a2f9dc05cea46e92ff620b6884dd *html/license.cosmo.html
d3f677a0791aa9fc1b480ed6a38dcc48 *html/makeBoundCon.html
7b323806e2d2850cad282733f14de5c6 *html/makeConSet.html
ae3455e0622416fe83d2b3677c663edc *html/makePalCon.html
b58d1d6a01515b2072ac6a2367c8c432 *html/makePosFreqCon.html
f5d0fe9178d58a099901583631bf5455 *html/makeShapeCon.html
b83fa5881a35762fbfe92dcf0d1c80c4 *html/makeShapeDiffCon.html
17145f13f1c61542d1f10b859eb45d86 *html/makeSubMotifCon.html
45b55d462f1ed05c15404f6e47cce76e *html/motifPWM.html
32e773a973f68d1aef9d325b3a0ac348 *html/palCon-class.html
8ac5846a0a16d6270e9b4b6339f2383b *html/posFreqCon-class.html
81ffee69931924947478d7d66a0bfbde *html/postProbs-class.html
aeabc041a6cab5dc223ec75665fc92be *html/readConFile.html
44061d3447d6696fc72c8605c86fd35e *html/rseq.html
d25fa63a0594770d401e0fa6b0d83af7 *html/shapeCon-class.html
99efc6634c060cf5896f3dcac290fb5c *html/shapeDiffCon-class.html
18e4161b7b45744b30df5f0182d1a0fd *html/simScore.html
3f52f17ee4f7795c995ed4acf7d037a0 *html/subMotifCon-class.html
7eb2ee1d40ab3bfe3cbe83c661cb64a7 *html/transMats.html
40669424d966ab011e1870975153b16d *html/writeConFile.html
7a18d0206e91c97f7cde875a16439ac3 *latex/Rhelp.zip
ea3c6d811c6b14f721bb723702fbbb80 *libs/cosmo.dll
5d56c1aaf5a4901a8403b11bc3331099 *man/cosmo.Rd.gz
