getDNAindex           package:beadarraySNP           R Documentation

_C_a_l_c_u_l_a_t_e _t_h_e _D_N_A _i_n_d_e_x _b_a_s_e_d _o_n _a_s_s_i_g_n_e_d _c_o_p_y _n_u_m_b_e_r _v_a_l_u_e_s _t_o _p_r_o_b_e_s

_D_e_s_c_r_i_p_t_i_o_n:

     Calculate the DNA index based on assigned copy number values to
     probes

_U_s_a_g_e:

     getDNAindex(cn.sum)

_A_r_g_u_m_e_n_t_s:

  cn.sum: list with elements 'dnaIndex, CN.total.nrm, states', see
          'createCNSummary'

_V_a_l_u_e:

     scalar. DNA index of an unaffected sample is 1

_A_u_t_h_o_r(_s):

     Jan Oosting

_S_e_e _A_l_s_o:

     'createCNSummary, plotGoldenGate4OPA'

