Entry: AlignNetworks
Aliases: AlignNetworks
Keywords: misc
Description: Align networks
URL: ../../../library/GraphAlignment/html/AlignNetworks.html

Entry: AlignedPairs
Aliases: AlignedPairs
Keywords: misc
Description: Get aligned node pairs
URL: ../../../library/GraphAlignment/html/AlignedPairs.html

Entry: AnalyzeAlignment
Aliases: AnalyzeAlignment
Keywords: misc
Description: Analyze an alignment
URL: ../../../library/GraphAlignment/html/AnalyzeAlignment.html

Entry: ComputeLinkParameters
Aliases: ComputeLinkParameters
Keywords: misc
Description: Compute link parameters
URL: ../../../library/GraphAlignment/html/ComputeLinkParameters.html

Entry: ComputeM
Aliases: ComputeM
Keywords: misc
Description: Compute score matrix M
URL: ../../../library/GraphAlignment/html/ComputeM.html

Entry: ComputeNodeParameters
Aliases: ComputeNodeParameters
Keywords: misc
Description: Compute node parameters
URL: ../../../library/GraphAlignment/html/ComputeNodeParameters.html

Entry: ComputeScores
Aliases: ComputeScores
Keywords: misc
Description: Compute scores
URL: ../../../library/GraphAlignment/html/ComputeScores.html

Entry: CreateScoreMatrix
Aliases: CreateScoreMatrix
Keywords: misc
Description: Create score matrix
URL: ../../../library/GraphAlignment/html/CreateScoreMatrix.html

Entry: EncodeDirectedGraph
Aliases: EncodeDirectedGraph
Keywords: misc
Description: Encode directed graph
URL: ../../../library/GraphAlignment/html/EncodeDirectedGraph.html

Entry: GenerateExample
Aliases: GenerateExample
Keywords: misc
Description: Generate example input data
URL: ../../../library/GraphAlignment/html/GenerateExample.html

Entry: GetBinNumber
Aliases: GetBinNumber
Keywords: misc
Description: Get bin number
URL: ../../../library/GraphAlignment/html/GetBinNumber.html

Entry: InitialAlignment
Aliases: InitialAlignment
Keywords: misc
Description: Create initial alignment
URL: ../../../library/GraphAlignment/html/InitialAlignment.html

Entry: InvertPermutation
Aliases: InvertPermutation
Keywords: misc
Description: Invert permutation
URL: ../../../library/GraphAlignment/html/InvertPermutation.html

Entry: LinearAssignment
Aliases: LinearAssignment
Keywords: misc
Description: Solve linear assignment problem
URL: ../../../library/GraphAlignment/html/LinearAssignment.html

Entry: MatrixToBin
Aliases: MatrixToBin
Keywords: misc
Description: Convert matrix to bin representation
URL: ../../../library/GraphAlignment/html/MatrixToBin.html

Entry: Permute
Aliases: Permute
Keywords: misc
Description: Permute rows and columns of a matrix
URL: ../../../library/GraphAlignment/html/Permute.html

Entry: Trace
Aliases: Trace
Keywords: misc
Description: Calculate trace of a matrix
URL: ../../../library/GraphAlignment/html/Trace.html

Entry: VectorToBin
Aliases: VectorToBin
Keywords: misc
Description: Convert vector to bin representation
URL: ../../../library/GraphAlignment/html/VectorToBin.html
