useDynLib(GGtools)

#
import(tools)
#
#exportClasses(
#
#exportMethods(
#
#export(
#

importFrom(graphics, plot)

import(Biobase, AnnotationDbi)

importFrom("RColorBrewer", "brewer.pal")

exportMethods( "show", "plot", "topSnps", "[", "getAbsSnpLocs",
 "initialize", "oneFit", "snps", "exprs", "racAssays", "snpNames", "SNPalleles",
 "snpScreen", "twSnpScreen", "imputeSNPFixed", "nsamp", "sampleNames",
 "getSnpLocs", "gwSnpScreen", "getSnpChroms", "getAlleles", 
 "plot_EvG", "getSnpData",
 "dim", "pos", "chromosome", "updateObject", "rawSNP", "annotation")

export("HMworkflow", "thinHM2rac", "exclMono", "thinHM2meta",
  "getRare", "genoStrings", "snps3PrimeTo", "snps5PrimeTo", "snpsNear",
  "Strains2rac", "wrapSNPmetaWh", "INBREDSworkflow", "addAnno",
  "tx_rsnum", "getSNPindices", "countRare", "make_racExSet", 
  "plot_mlp", "fastAGMfitter", "fastHETfitter")

