mapGenes2GOgraph            package:topGO            R Documentation

~~_f_u_n_c_t_i_o_n _t_o _d_o ... ~~

_D_e_s_c_r_i_p_t_i_o_n:

     TODO: This function builds for each node a vector containing all
     the genes/probes that can be annotated to that node. It starts
     with the nodes on the lowest level, and then pushes their genes to
     the parents/ancestors

_U_s_a_g_e:

     mapGenes2GOgraph(dag, mostSpecificGOs, nodeLevel = buildLevels(dag, leafs2root = TRUE))

_A_r_g_u_m_e_n_t_s:

     dag: ~~Describe 'dag' here~~ 

mostSpecificGOs: ~~Describe 'mostSpecificGOs' here~~ 

nodeLevel: ~~Describe 'nodeLevel' here~~ 

_D_e_t_a_i_l_s:

     ~~ If necessary, more details than the description above ~~

_V_a_l_u_e:

     An object of class 'graphNEL-class' is returned. The attribute of
     each node in the graph contains a mapping of the genes/probes.

_A_u_t_h_o_r(_s):

     Adrian Alexa

_S_e_e _A_l_s_o:

     'topGOdata-class', 'buildLevels', 'buildGOgraph.topology',
     'annFUN.hgu'

_E_x_a_m_p_l_e_s:

     ##---- Should be DIRECTLY executable !! ----
     ##-- ==>  Define data, use random,
     ##--    or do  help(data=index)  for the standard data sets.

