checkMarkers            Basic data quality checks for markers
checkMendelian          Check Mendelian Errors
fbat                    Family-Based Association Tests
getFounders             Get founders' information
missGFreq               Count frequencies of missing genotypes
pedAFreq                get allele frequencies
pedFlagHomo             flag homo/heterozygotes
pedGFreq                get genotype frequencies
pedHardyWeinberg        Test Hardy-Weinberg equilibrium for each marker
                        based on parental data
readHapMap              Import HapMap data
readLink                Import file with PLINK data format
readPed                 Import pedigree file from standard pedigree
                        file format
sampleInfoCEU           Information about HapMap CEU subjects
sampleInfoCHB           Information about HapMap CHB subjects
sampleInfoJPT           Information about HapMap JPT subjects
sampleInfoYRI           Information about HapMap YRI subjects
summaryPvalue           summarize the test statistics and p-values
viewFlagHomo            flag homo/heterozygotes for specified marker
viewHW                  View allele frequencies, Hardy-Weinberg
                        equilibrium test statistics for specified
                        marker
viewstat                view statistics for a marker
