distance             package:VanillaICE             R Documentation

_A_c_c_e_s_s_o_r _f_o_r _d_i_s_t_a_n_c_e

_D_e_s_c_r_i_p_t_i_o_n:

     Indicates whether distance between SNPs (in base pairs) was used
     to estimate transition probabilities for the HMM

_U_s_a_g_e:

     distance(object)

_A_r_g_u_m_e_n_t_s:

  object: one of the HMM classes defined in 'ICE'

_D_e_t_a_i_l_s:

_V_a_l_u_e:

     Logical: if TRUE, the distance between SNPs was used to derive a
     SNP-specific transition probability matrix.

_N_o_t_e:

_A_u_t_h_o_r(_s):

_R_e_f_e_r_e_n_c_e_s:

     RB Scharpf et al. (2007), Department of Biostatistics Working
     Papers, Working Paper 136

     MA Newton et al. (1998) On the statistical analysis of
     allelic-loss data. Stat Med 17(13):1425-45

_S_e_e _A_l_s_o:

_E_x_a_m_p_l_e_s:

