copyNumberIce           package:VanillaICE           R Documentation

_W_h_e_t_h_e_r _t_o _u_s_e _t_h_e _u_n_c_e_r_t_a_i_n_t_y _e_s_t_i_m_a_t_e_s _o_f _t_h_e _c_o_p_y _n_u_m_b_e_r _i_n
_t_h_e _H_M_M

_D_e_s_c_r_i_p_t_i_o_n:

     When true, the HMM uses the uncertainty estimaes of the copy
     number stored in the 'assayDataElement' 'cnConfidence'

_U_s_a_g_e:

     copyNumberIce(object)

_A_r_g_u_m_e_n_t_s:

  object: Object of class 'HmmSnpCopyNumberSet'

_D_e_t_a_i_l_s:

_V_a_l_u_e:

     Logical

_N_o_t_e:

_A_u_t_h_o_r(_s):

_R_e_f_e_r_e_n_c_e_s:

_S_e_e _A_l_s_o:

_E_x_a_m_p_l_e_s:

