Entry: MassSpecWavelet-package
Aliases: MassSpecWavelet-package MassSpecWavelet
Keywords: package
Description: Peak detection of mass spectrum by Wavelet transform based methods
URL: ../../../library/MassSpecWavelet/html/MassSpecWavelet.package.html

Entry: cwt
Aliases: cwt
Keywords: methods
Description: Continuous Wavelet Transform (CWT)
URL: ../../../library/MassSpecWavelet/html/cwt.html

Entry: exampleMS
Aliases: exampleMS
Keywords: datasets
Description: An example mass spectrum
URL: ../../../library/MassSpecWavelet/html/exampleMS.html

Entry: extendLength
Aliases: extendLength
Keywords: methods
Description: Extend the length of a signal or matrix
URL: ../../../library/MassSpecWavelet/html/extendLength.html

Entry: extendNBase
Aliases: extendNBase
Keywords: methods
Description: Extend the row number of a matrix as the exponential of base N
URL: ../../../library/MassSpecWavelet/html/extendNBase.html

Entry: getLocalMaximumCWT
Aliases: getLocalMaximumCWT
Keywords: methods
Description: Identify the local maximum of each column in 2-D CWT coefficients matrix
URL: ../../../library/MassSpecWavelet/html/getLocalMaximumCWT.html

Entry: getRidge
Aliases: getRidge
Keywords: methods
Description: Identify ridges based on the local maximum matrix
URL: ../../../library/MassSpecWavelet/html/getRidge.html

Entry: getRidgeLength
Aliases: getRidgeLength
Keywords: methods
Description: Estimate the length of the ridge
URL: ../../../library/MassSpecWavelet/html/getRidgeLength.html

Entry: getRidgeValue
Aliases: getRidgeValue
Keywords: methods
Description: Get the CWT coefficient values corresponding to the peak ridge
URL: ../../../library/MassSpecWavelet/html/getRidgeValue.html

Entry: identifyMajorPeaks
Aliases: identifyMajorPeaks
Keywords: methods
Description: Identify peaks based on the ridges in 2-D CWT coefficient matrix
URL: ../../../library/MassSpecWavelet/html/identifyMajorPeaks.html

Entry: localMaximum
Aliases: localMaximum
Keywords: methods
Description: Identify local maximum within a slide window.
URL: ../../../library/MassSpecWavelet/html/localMaximum.html

Entry: mzInd2vRange
Aliases: mzInd2vRange
Keywords: methods
Description: Match m/z index to m/z value with a certain error range
URL: ../../../library/MassSpecWavelet/html/mzInd2vRange.html

Entry: mzV2indRange
Aliases: mzV2indRange
Keywords: methods
Description: Match m/z value to m/z index with a certain error range
URL: ../../../library/MassSpecWavelet/html/mzV2indRange.html

Entry: peakDetectionCWT
Aliases: peakDetectionCWT
Keywords: methods
Description: The main function of peak detection by CWT based pattern matching
URL: ../../../library/MassSpecWavelet/html/peakDetectionCWT.html

Entry: plotLocalMax
Aliases: plotLocalMax
Keywords: hplot
Description: Plot the local maximum matrix
URL: ../../../library/MassSpecWavelet/html/plotLocalMax.html

Entry: plotPeak
Aliases: plotPeak
Keywords: hplot
Description: Plot the identified peaks over the spectrum
URL: ../../../library/MassSpecWavelet/html/plotPeak.html

Entry: plotRidgeList
Aliases: plotRidgeList
Keywords: hplot
Description: Plot the ridge list
URL: ../../../library/MassSpecWavelet/html/plotRidgeList.html

Entry: smoothDWT
Aliases: smoothDWT
Keywords: methods
Description: smooth (denoise) the spectrum by DWT (Discrete Wavelet Transform)
URL: ../../../library/MassSpecWavelet/html/smoothDWT.html

Entry: tuneInPeakInfo
Aliases: tuneInPeakInfo
Keywords: methods
Description: Tune in the peak information: peak position and peak scale
URL: ../../../library/MassSpecWavelet/html/tuneInPeakInfo.html
