a7ec78583fc1005ce5b0951f320503a2 *CITATION
bde3f77464805f8f1f90c7d15c408177 *CONTENTS
9ebba1185c37bcc044e8ee78424bdcc5 *DESCRIPTION
17637e57b059b3a96a02daeb6ae485ca *INDEX
985fdbc57d68ed3f80c38827248cbd24 *Meta/Rd.rds
e3c40a6a9bf86e7cba1404a78c41a594 *Meta/hsearch.rds
e2a179a5a6ac3335fd349134c5f52186 *Meta/nsInfo.rds
99b4a6fc9954da038a06626c6c42f753 *Meta/package.rds
ade36ad33d6dfbe44523aa1477bf9db1 *Meta/vignette.rds
7c66d5b2842d930df665ca723639778a *NAMESPACE
0838667e2ff25697d7660c37ee9358a3 *R-ex/PMindex.R
f37e6ee6d10d75c5914352952fab5fcf *R-ex/class-segmentation.R
a1c683fc55b8e7ddc0ab2638f29adc66 *R-ex/comparisonPlot.R
1462ab03310154b52a9ddcc54fc7258d *R-ex/costMatrix.R
08e647fae03a3c37611eae7a575e81ec *R-ex/findsegments.R
a63e68bd55d9931b022251e8fdffa4ac *R-ex/normalizeByReference.R
fcee24b1d24eabef157754329fd45f50 *R-ex/otherStrand.R
0a5f66da65c39169ad38d2fa789059af *R-ex/plotAlongChrom.R
b1232e5d6f600116f4c2052c7b740b72 *R-ex/plotAlongChromLegend.R
7f26e259d13761b2667843fbd0c5cdac *R-ex/plotFeatures.R
ce58b3933d7164d5054baf4bcd9f2c00 *R-ex/plotSegmentationDots.R
f87cde0ad2a421925daa5719f710cd33 *R-ex/plotSegmentationHeatmap.R
d92dc0a0b5bee4502cb2c41b12b34a06 *R-ex/posMin.R
dc092620af74b0fd564d363bcf145b5f *R-ex/qcPlots.R
cc7a5887a120c4b80bd0a73186465b45 *R-ex/readCel2eSet.R
046126e8ae906ccbb4ef8146805cb04d *R-ex/sampleStep.R
6ba9cff6b3ec97479823f8e666c0c2c7 *R-ex/segChrom.R
8ac6641699cb0eb058abf1804c97e3ec *R-ex/segment.R
d270d7b70ccc15901769cc1b0189bcf2 *R/all.rda
f57249e458f39c7b5e855acc6ed19220 *R/tilingArray
54cd6106da1f58a85cca0c0d0627eddb *chtml/tilingArray.chm
c69a77fbbe550ecfe5bad432bb1001b2 *doc/Rplots.ps
77cfbf29a8147fbc22680662d2cac63d *doc/assessNorm.pdf
288a3648e6171da6fbc6ed94a5d153c5 *doc/costMatrix.pdf
e4aa501b835bda5f5d7d790cdf493d68 *doc/costMatrix.tex
87c7ab9116679c59456b58ab40e5fe93 *doc/findsegments.Rnw
df92826d35e4257a68ba05901f7b5bab *doc/findsegments.pdf
e472c739d707b7f8e639e5033b78be3b *doc/index.html
89119b9b1d2e34e671249c360bce2846 *doc/segmentation.pdf
78851e50e0523a03e42233879526fd9a *help/AnIndex
03f08b4f3482fbb4e3f3df666b16fae3 *help/PMindex
7ad37ba1900a395f0023f17d473cdcf4 *help/breakpointsPretend
6a7fd022e0ae2ed9036cc9ca225df319 *help/class-segmentation
4e690b209d44cf53479a265991b4589c *help/comparisonPlot
e93bafaca23bc08342fe93ce817c578b *help/costMatrix
0dfd842ca5ce86814548bbcda52801c8 *help/findsegments
ff9a0d29b3a0615ba90e9c4a7bae2a91 *help/normalizeByReference
2eae110f9bca57042e78adb93ec9d251 *help/otherStrand
14466fab9120bf5fb84c93f9a30b482f *help/plotAlongChrom
6c5186c88e5ca44eaa6c2c5ded0b04e8 *help/plotAlongChromLegend
8fce32b0e6498a0ff584a3b8b3778f7b *help/plotFeatures
99f1860cb01b0bb56a8a77c09555f1de *help/plotSegmentationDots
2e542e04257c93356de94865d97577c5 *help/plotSegmentationHeatmap
8ab687a541f43bf4b220f8bef4a80c53 *help/posMin
b68584edd7b84dcdb4bfdb6fd89df278 *help/qcPlots
a3ab29167e183c9fab2a14ef3a7166eb *help/readCel2eSet
8edcf9369581675958d93d12b87cf5da *help/sampleStep
dfcbbd7fb03391c18245b1338479f001 *help/segChrom
b21bf8ffff7ed4dd527a86575f46da6a *help/segment
cba5994650aa776ed3a5d3deda36a20e *help/tilingArray-package
778d298daf4379e866dd2e88dfa82760 *html/00Index.html
33c170ed7678207a24fc59fae4dc49ef *html/PMindex.html
66b30c0f6e762b5318ac36b425922b24 *html/breakpointsPretend.html
1bd84e26b12e364e8f5ecc2c5c87e0b8 *html/class-segmentation.html
6f8416441c63f8adf350595134d7721a *html/comparisonPlot.html
bb5ef68fe89e2bb25a6b2c74784bf5e8 *html/costMatrix.html
e10c6447e5462f4d1e9d65a7971f6ba5 *html/findsegments.html
e12d515d827e6279f5bddf1ffba6d2e4 *html/normalizeByReference.html
6dc050b25d6194ac8362fb447c45182b *html/otherStrand.html
aa68c4dbe1fc0c9629b1c7f9d81cf437 *html/plotAlongChrom.html
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8e4b19c1fe1a319b9770c09ad7b3b835 *html/plotFeatures.html
08826f4b6114396921837efd1c42dfce *html/plotSegmentationDots.html
7ed7fda8d01e849d9134deb50d09f138 *html/plotSegmentationHeatmap.html
2cabc88bb62b44e50f9bdf19887f03b3 *html/posMin.html
10ab0778309be55836b2892406032448 *html/qcPlots.html
e79086275b2ceebfff72ebd2f9779123 *html/readCel2eSet.html
59828e57e8cf4e735e3b05a98fcda769 *html/sampleStep.html
a6e346860c8674948f81c88ea18f6657 *html/segChrom.html
6c2cd4954d96d0dd512b3b3d87d65ecb *html/segment.html
3b409152cb7a693efddbce9c1fb4de5a *html/tilingArray-package.html
dc58ee5e427247182ebd1cf19d3a3d6d *latex/PMindex.tex
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386a1e2baa1d7cff3f9f51dd7eeed320 *latex/costMatrix.tex
beaf09331ac581260d4092104008d661 *latex/findsegments.tex
573ae9e5c9b271eec1c60d0413d693c7 *latex/normalizeByReference.tex
212f56939a89d539dac66a50827e1108 *latex/otherStrand.tex
8dc18ac52a3da68fcafe7dc65a519049 *latex/plotAlongChrom.tex
0ab0e36cb12d88eedeca8df1c68ae49f *latex/plotAlongChromLegend.tex
bf276a7e9de659ef8a64570c906a0692 *latex/plotFeatures.tex
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e7b288ec6f1cd324f9bc89315136c8ff *latex/plotSegmentationHeatmap.tex
b6b676871536c16bdc87eb6312b097ff *latex/posMin.tex
89f5b6227623480ddb8fcbe906450bc8 *latex/qcPlots.tex
c7fd9c7645cca9add1459cea548db879 *latex/readCel2eSet.tex
578c83d299ef3a240e52b8c3775d913c *latex/sampleStep.tex
6769adefc20c94adc59bf08aab842159 *latex/segChrom.tex
5067173c0b1e04925c50f7768c5abfdc *latex/segment.tex
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6fde94587c0e8094f3910c052d1aed24 *libs/tilingArray.dll
3f4ebc85b4f0a35bc35be0f5000f445c *man/tilingArray.Rd.gz
4c7174ea784fad8527d62d159a938f1f *scripts/assessNorm.Rnw
a7912dfd42b098d5deb89b2d9cc34c6b *scripts/createNormIntensitiesFlatfile.R
852148e648462836aa26fb1eb0416446 *scripts/marina.R
b489f3cb57fd3c93fcec128e469df226 *scripts/segVariance.Rnw
8834f825b5eaa3ccb375c6220dcf2aad *scripts/segmentation.Rnw
4aa4bd3d6bd0f1aa2b8084954f502000 *scripts/testSegmentationConfint.R
