degreeStats             package:y2hStat             R Documentation

_A _f_u_n_c_t_i_o_n _t_o _c_a_l_c_u_l_a_t_e _t_h_e _v_a_r_i_o_u_s _d_e_g_r_e_e _s_t_a_t_i_s_t_i_c_s _o_n _t_h_e
_i_n_d_u_c_e_d _y_2_h-_d_a_t_a _d_e_r_i_v_e_d _d_i_r_e_c_t_e_d _g_r_a_p_h.

_D_e_s_c_r_i_p_t_i_o_n:

     This function will create the adjacency matrix for each
     experimental set of Y2H data set, and then it will calculate the
     various degree statistics.

_U_s_a_g_e:

     degreeStats(y2h)

_A_r_g_u_m_e_n_t_s:

     y2h: A three tiered list. Names of the second tier corresponds to
          ID of experiment. Names of the third tier should be the bait
          proteins. The entries of the third tier are character vectors
          of proteins detected as prey

_V_a_l_u_e:

  degree: A numeric vector of the out-degree for each bait protein

     min: A numeric - the minimal degree

     max: A numeric - the maximal degree

     med: A numeric - the median degree

    mean: A numeric - the mean degree

_A_u_t_h_o_r(_s):

     T Chiang

_E_x_a_m_p_l_e_s:

     data(y2hSysGW)
     eg = y2hSysGW[3]
     degreeStats(eg)

