createTables             package:y2hStat             R Documentation

_A _f_u_n_c_t_i_o_n _t_o _c_r_e_a_t_e _a _t_a_b_l_e _o_f _t_h_e _v_a_r_i_o_u_s _s_u_m_m_a_r_y _s_t_a_t_i_s_t_i_c_s
_f_o_r _t_h_e _Y_2_H _e_x_p_e_r_i_m_e_n_t_a_l _d_e_r_i_v_e_d _d_a_t_a.

_D_e_s_c_r_i_p_t_i_o_n:

     This function takes in a three tiered list. The top tier is the
     main list which is passed in by the user. The second tier set of
     lists should be named or referenced by experimentors. The third
     tier is a list of bait to prey associations. The names in the
     third tier of the list are those proteins sampled as baits, and
     the entries are character vectors of proteins detected as prey.
     From this data, the function generates a table of various summary
     statistics.

_U_s_a_g_e:

     createTables(y2h)

_A_r_g_u_m_e_n_t_s:

     y2h: A three tiered list. Names of the second tier corresponds to
          ID of experiment. Names of the third tier should be the bait
          proteins. The entries of the third tier are character vectors
          of proteins detected as prey

_V_a_l_u_e:

     A table of statistics: 

 Column1: Number of baits

 Column2: Number of interactions experiment wide

 Column3: Ratio of baits to interactions

 Column4: Min Degree

 Column5: Max Degree

 Column6: Median Degree

 Column7: Mean Degree

_A_u_t_h_o_r(_s):

     T Chiang

_E_x_a_m_p_l_e_s:

     data(y2hSysGW)
     eg = y2hSysGW[3]
     createTables(eg)

