baitsOnly               A function that filters proteins not sampled as
                        baits.
bpMatrix                This function generates the Bait-Prey Matrix
                        for an experiment
collectBPStats          This function enumerates the multiplicity of
                        bait to prey occurances.
collectIntactData       A function that parses the Intact repository
                        for bait to prey affiliation
collectMembranePPI      A function to collect the membrane bound
                        protein protein interactions.
createBPList            A function to create the Bait to Prey
                        association list.
createTables            A function to create a table of the various
                        summary statistics for the Y2H experimental
                        derived data.
degreeStats             A function to calculate the various degree
                        statistics on the induced y2h-data derived
                        directed graph.
findComplexBP           A function to intersect Y2H data with protein
                        complex composition data
genBPGraph              A function to generate the Y2H induced adjcency
                        matrix or its corresponding graph
inNucleus               A function to determine those proteins
                        annotated by the nucleus GO term.
intAct2Sys              A function that maps the Intact ID's to the
                        first YEAST systematic name using the YEAST
                        package
intActData              A data set documenting the output of
                        collectIntactData
map2Systematic          A function that maps the Intact ID's to Yeast
                        Systematic Names if possible
map2Systematic2         A secondary function that maps the Intact ID's
                        to Yeast Systematic Names if possible
membranePPI             Binary Interactions for membrane bound proteins
nucStat                 A function to restrict the indexing set of bait
                        prey adjcency matrices
ppipred                 Protein-protein predictions
recipBP                 A function that returns all preys which were
                        sampled as baits that also detected non-trivial
                        preys.
sWAC2Sys                A data set that contains the translation
                        between Swiss Acension Codes to Gene Systematic
                        Names
symInteraction          A function that returns symmetric bait to prey
                        interactions from the y2h experiments.
tableList               A list of tables for the downloaded and parsed
                        xml files from the IntAct database
y2h                     A data set documenting the bait to prey
                        associations for the IntAct repository
y2hSysGW                A Binary Interaction List for Yeast Proteins
                        via Systematic Names
