qualityScore          package:arrayQuality          R Documentation

_Q_u_a_l_i_t_y _C_o_n_t_r_o_l _s_c_o_r_e _f_o_r _g_e_n_e_r_a_l _h_y_b_r_i_d_i_z_a_t_i_o_n

_D_e_s_c_r_i_p_t_i_o_n:

     This function returns, for each quality measure, the percentage of
     reference slides measures which are below the tested slide values.
     For more details on this score, refer to the online manual.

_U_s_a_g_e:

     qualityScore(slidequality, organism = c("Mm", "Hs"), reference =
     NULL)

_A_r_g_u_m_e_n_t_s:

slidequality: A quality matrix from slideQuality.

reference: A matrix resulting from globalQuality, to be used as
          reference table to compare slides. If 'NULL', the default
          table corresponding to organism will be used. See details for
          more information.

organism: A "character" string naming the organism genome printed on
          the array, either "Mm" or "Hs". By default, organism is set
          to "Mm". It is used to retrieve the corresponding reference
          tables.

_V_a_l_u_e:

     A matrix of percentages.

_A_u_t_h_o_r(_s):

     Agnes Paquet

