Entry: ALGchangeLog
Aliases: ALGchangeLog
Keywords: documentation
Description: affylmGUI Change Log
URL: ../../../library/affylmGUI/html/ALGchangeLog.html

Entry: affylmGUI
Aliases: affylmGUI AboutaffylmGUI AboutCustomMenu AboutNormalization addMenuItem affylmGUI affyPlotMA affyPlotMAcontrast ChooseCDF ChooseContrastParameterization chooseDir ChooseEbayesStatistic ComputeContrasts ComputeLinearModelFit CopyGraph DeleteContrastParameterization DeleteCustomMenuItem deleteItemFromList DensityPlot evalRcode ExportTopTable ExportHTMLreport ExportNormalizedExpressionValues generalPlotFunction GetComponentsToExportInHTMLreport GetContrast GetContrastNamesForHeatDiagram GetContrastParameterizationName GetContrasts GetCustomMenuItemNum GetDEcutoff GetGeneLabelsOptions GetJpegOrPngParams GetJpegOrPngX11Params GetlimmaDataSetName GetMenuName GetMultipleContrasts GetNormalizationMethod getPackageVersion GetParameterizationName GetPlotLabels GetPlotSize GetPlotTitle GetRNATypesFrom.ContrastsFromDropDowns.String GetSetNames GetSlideNum GetSlideNums GetWhichProbes GetWtAreaParams GetWtFlagParams HeatDiagramDialog HeatDiagramPlot HTMLplotUsingFunction ImageArrayPlot ImageQualityPlot initGlobals IntensityHistogram LogOddsPlot NewLimmaFile NormalizedIntensityBoxPlot NormalizeNow nstrstr onExit OpenCDFandTargetsfiles OpenCDFFile OpenALimmaFile OpenLimmaFile OpenTargetsFile QQTplot RawIntensityBoxPlot Require Resize SaveAsLimmaFile SaveGraphAsJpeg SaveGraphAsPDF SaveGraphAsPNG SaveGraphAsPostscript SaveLimmaFile SetupPlotKeyBindings SetupPlotMenus SetWD showTopTable SimplifyContrastsExpression strstr tclArrayVar TclRequire toptable2 topTable2 Try TryReadImgProcFile UpDownOrBoth vennDiagramaffylmGUI VennDiagramPlot ViewContrastsMatrixAsPairs ViewContrastsMatrixInTable ViewExistingContrastParameterization ViewRNATargets affyHelp affylmGUIhelp limmaHelp ALGlimmaUsersGuide showCitations showChangeLog onDestroy GetPValueCutoff fixSeps PlotOptions
Keywords: IO
Description: Graphical User Interface for the limma microarray package
URL: ../../../library/affylmGUI/html/affylmGUI.html
