60284da1f8ccf557b54327f5f5342db2 *DESCRIPTION
8c44de46d76195d35e794feac4304b01 *INDEX
1390ddbb22d464acc0ed51f2cb01c714 *Meta/Rd.rds
277e00644bd250d0292cfc1dc70dcc52 *Meta/data.rds
084f53106fec613983e5939980f69dc4 *Meta/hsearch.rds
293e6da9e0be921b26ce4a1ba4881131 *Meta/links.rds
06f2cd764bacb7423035737aa19f8010 *Meta/nsInfo.rds
5a30cff07913aa8de1ba09cd32f6f103 *Meta/package.rds
89b2d77ef5dd1e30be66f3a425b6f8b0 *Meta/vignette.rds
653b21f755e8d111259516048cdc2fdd *NAMESPACE
f07d3015c4220dea7a7be8c741d2985b *R/chipseq
c50ea9365d57f36266fd7f2c3a95bea7 *R/chipseq.rdb
8de56604801216c2d920588cfe626109 *R/chipseq.rdx
c67ac49dbe2a5c389a1b642feed5cbc9 *Scripts/AntibodyComparison.Rnw
cc525267a4c24163de9b36205b6d305c *Scripts/CTCFBindingSites.R
ca9cf8135dd0e90c84a79c7d25b67f8e *Scripts/CTCF_ERV.R
aee97330bc6fc5325ce931bed2ce78db *Scripts/CopyNumber.Rnw
b9fdf9ddd9d25837d91b84181d44a947 *Scripts/Islands.Rnw
d3e0e7d6d67905e3f34b7b3115d6729a *Scripts/MyoD.R
70ed9c49dec4afdb22fde785402b70ba *Scripts/PairedEndComparison.Rnw
dcb4e37001f03145920d1c8ff3117e0f *Scripts/PeakContextHuman.Rnw
e22d7dbd060325161369d0e7e2e58809 *Scripts/PeakContextMouse.Rnw
bf012dbfcfee1aee1d476b131ff815b6 *Scripts/PeakCutoff.Rnw
027314cba8b874dc1d337a24048faf6a *Scripts/PeakModel.Rnw
10a39afb911fbcfd768ce3f473074e6e *Scripts/PeakReproducibility.Rnw
fc5f8df77609407d4dde159745ead9de *Scripts/PeaksByCopyNumber.Rnw
727166198a38cc8d25d326ca1eb40ec4 *Scripts/RateComparison.Rnw
aa70f1fa6f051112a2d02f42a95ce676 *Scripts/ReadAndSave54.R
ae7894a5b856dbaf4eb47efb18a37aaa *Scripts/ReadAndSaveCTCF.R
42e617263ffdc34e7ca72e2812520574 *Scripts/ReadAndSaveData.R
05caa000363574dcdbb4f33f43adc444 *Scripts/ReadAndSaveSimulation.R
0499bfe7ca2da5b930300dcea653fe3f *Scripts/SolexaSim.R
8418412635db910c56247de35566e5e9 *Scripts/abc.rda
6c9675a0bc2e44e69215f5cb7bac2cc2 *Scripts/antibody_comparison.R
ed4f51f8bcebaf4eeeb5c96ff4879c24 *Scripts/dePeaks.R
350f3ec02207bd159a8a954903044292 *Scripts/diffpeak.R
00ef5383b472ded5028fa377e7765971 *Scripts/diffpeaks.R
837228bc953727b032e40cbb6205a57d *Scripts/estimate_fragment_size.R
1ff0bca2429a01f76f257a80b0454e6f *Scripts/fibroblasts.R
e72faaaedf165cab4014877a5c052884 *Scripts/getIsochores.R
3783000fdd3bf5e218849c3c4f13125f *Scripts/hmm.R
4b7c58b557ccce7b42ccc011b4d82021 *Scripts/human-islands.R
b96813cecca271616421a0c1b1686427 *Scripts/isochore_comparison.R
f7328263dd15bd2151f28b1608cbbb49 *Scripts/isochores.mm9.rda
c7a667f5161cfde7f01daaa6d4caa464 *Scripts/negbinomial.R
8fdf8714faf613d145e0b0bc340fed82 *Scripts/peakContext.R
786298cc4d4d8d7fba7ac8a3cdf3bdc5 *Scripts/peak_mle.R
e14f736999fe4d70f015fb4d4e39ba68 *Scripts/poisson.R
2d307d1468ebac6eea2f052f07bb4e30 *Scripts/simulate.R
bf32b8fbb5ae9f6aca83195bf78deae3 *Scripts/singletons.Rnw
0fcc7537138acfcc09e30c49953c8810 *Scripts/solexa54.R
0ae152c7d1f9af51468bddd66e99895c *data/Rdata.zip
46de3a9b99e861907f61d64ba6e5c1fe *data/filelist
6bacad8a05d463e26e4698f71b8ca83d *doc/Rplots.pdf
1745e0fe38f91f19bc72a80ae813e621 *doc/Workflow.R
45be4b6725ec9ddb9f96d632939ef5f7 *doc/Workflow.Rnw
c54a3f5ce47afdd444473e282601b8bc *doc/Workflow.pdf
3e2f9090fab707fd7981b4265133832b *doc/index.html
b526b6e53d883ec7f04c576280f7f128 *help/AnIndex
500d4402f87637a92d8a190965e72203 *help/aliases.rds
67fe7f1b51b648e7a475e7088798792d *help/chipseq.rdb
9543d5fa606f8135ed1410072d9b8732 *help/chipseq.rdx
5a22344c4d5672c44b822de0f21c3c3d *help/paths.rds
5df1c4aa04a7ba0525dfb1159e368e26 *html/00Index.html
d924ba84938ee38efd31c6fdc2499275 *libs/chipseq.dll
