groupCount             package:goCluster             R Documentation

_C_o_u_n_t _t_h_e _n_u_m_b_e_r _o_f _c_l_u_s_t_e_r_s

_D_e_s_c_r_i_p_t_i_o_n:

     Counts the number of elements in a tree (list of lists).

_U_s_a_g_e:

     groupCount(X)

_A_r_g_u_m_e_n_t_s:

       X: A tree (list of lists) of clusters 

_D_e_t_a_i_l_s:

     Traverses a tree from the top to the leave nodes and counts the
     number of leave nodes or elements.

_V_a_l_u_e:

     The number of elements in the tree

_A_u_t_h_o_r(_s):

     Gunnar Wrobel, <URL: http://www.gunnarwrobel.de>.

_S_e_e _A_l_s_o:

     'clusterSignifFDR-class'

_E_x_a_m_p_l_e_s:

     set.seed(1000)

     data(benomylsetupsmall)

     a <- new("goCluster")

     execute(a) <- benomylsetupsmall

     ## Counts the number of clusters that have been analyzed in
     ## the statistical module of goCluster. This number is the
     ## product of the number of clusters in a single clustering
     ## and the number of randomized repeats that were analyzed
     ## for the FDR analysis
     groupCount(a@sign@stat@statset)

