Entry: Bnapus
Aliases: Bnapus
Keywords: datasets
Description: Cross structure for complete Brassica napus data
URL: ../../../library/bim/html/Bnapus.html

Entry: bim-internal
Aliases: bim-internal .bmapqtl.options bmapqtl.options.init bim.cex bim.cross bim.legacy bim.match bim.prior bim.smooth plot.bim.pattern
Keywords: internal
Description: Internal bim functions.
URL: ../../../library/bim/html/bim-internal.html

Entry: bim.effects
Aliases: bim.effects plot.bim.effects
Keywords: models hplot
Description: Bayesian QTL map of loci and effects
URL: ../../../library/bim/html/bim.effects.html

Entry: bim.fdr
Aliases: bim.fdr plot.bim.fdr
Keywords: models hplot
Description: Bayesian False Discovery Rate for QTL mapping
URL: ../../../library/bim/html/bim.fdr.html

Entry: bim.model
Aliases: bim.model bim.nqtl bim.pattern
Keywords: models
Description: Bayesian model selection for number and pattern of QTL across genome
URL: ../../../library/bim/html/bim.model.html

Entry: bim.
Aliases: bim.qtl plot.bim.qtl
Keywords: models hplot
Description: Bayesian QTL estimation and mapping of loci
URL: ../../../library/bim/html/bim.qtl.html

Entry: bmapqtl.options
Aliases: bmapqtl.options
Keywords: utilities
Description: Options Settings for BmapQTL
URL: ../../../library/bim/html/bmapqtl.options.html

Entry: fisch
Aliases: fisch fisch.bim
Keywords: datasets
Description: Eight QTL Stephens and Fisch simulated data
URL: ../../../library/bim/html/fisch.html

Entry: plot.bim
Aliases: plot.bim
Keywords: hplot models
Description: Diagnostics plots for Bayesian interval mapping
URL: ../../../library/bim/html/plot.bim.html

Entry: plot.bim.diag
Aliases: plot.bim.diag
Keywords: models
Description: Marginal and model-conditional summaries of Bayesian interval mapping diagnostics
URL: ../../../library/bim/html/plot.bim.diag.html

Entry: plot.bim.loci
Aliases: plot.bim.loci
Keywords: models
Description: Jittered plot of Bayesian QTL loci samples by chromosome
URL: ../../../library/bim/html/plot.bim.loci.html

Entry: plot.bim.mcmc
Aliases: plot.bim.mcmc
Keywords: models
Description: Bayesian MCMC sequence plots for burnin and iterations.
URL: ../../../library/bim/html/plot.bim.mcmc.html

Entry: plot.bim.model
Aliases: plot.bim.model
Keywords: models
Description: Graphical model assessment for Bayesian interval mapping
URL: ../../../library/bim/html/plot.bim.model.html

Entry: read.bim
Aliases: read.bim
Keywords: file
Description: Read samples from WinQTL output
URL: ../../../library/bim/html/read.bim.html

Entry: read.bmapqtl
Aliases: read.bmapqtl write.bmapqtl
Keywords: file
Description: Read and write options for WinQTL
URL: ../../../library/bim/html/read.bmapqtl.html

Entry: run.bmapqtl
Aliases: run.bmapqtl
Keywords: models
Description: Run Bmapqtl reversible jump MCMC
URL: ../../../library/bim/html/run.bmapqtl.html

Entry: subset.bim
Aliases: subset.bim
Keywords: utilities
Description: Subsetting Bayesian interval mapping data
URL: ../../../library/bim/html/subset.bim.html

Entry: summary.bim
Aliases: summary.bim summary.bim.model summary.bim.qtl
Keywords: utilities
Description: Summary of Bayesian interval mapping samples
URL: ../../../library/bim/html/summary.bim.html

Entry: vern
Aliases: vern verngeo.bim vernpois.bim
Keywords: datasets
Description: Eight week vernalization data for Brassica napus
URL: ../../../library/bim/html/vern.html
