cluster                 package:GLAD                 R Documentation

_O_p_t_i_m_a_l _n_u_m_b_e_r _o_f _c_l_u_s_t_e_r

_D_e_s_c_r_i_p_t_i_o_n:

     The function 'cluster' in an internal function which allows to
     find the optimal number of cluster in the data.

_U_s_a_g_e:

     cluster.default(CGH, Cluster, region, labels, lambda, nmin, nmax, ...)

_A_r_g_u_m_e_n_t_s:

     CGH: CGH

 Cluster: Cluster

  labels: labels

  lambda: Penalty lambda*.

    nmin: Minimal number of cluster to find.

    nmax: Maximal number of cluster to find.

  region: Label which indicated where outliers are detected.

     ...: Parameters to be passed to the 'kernelpen' function.

_D_e_t_a_i_l_s:

     This function is called within 'findCluster.profileChr'.

_A_u_t_h_o_r(_s):

     Philippe Hup, Philippe.Hupe@curie.fr.

_S_e_e _A_l_s_o:

     'findCluster.profileChr'

