bayesFun             package:marrayTools             R Documentation

_A _f_u_n_c_t_i_o_n _t_h_a_t _c_a_l_c_u_l_a_t_e_s _a_n _o_d_d_s _r_a_t_i_o _o_f _e_a_c_h _g_e_n_e _i_n _a
_m_u_l_t_i-_s_l_i_d_e _m_i_c_r_o_a_r_r_a_y _e_x_p_e_r_i_m_e_n_t

_D_e_s_c_r_i_p_t_i_o_n:

     This is a wrapper function around stat.bay.est which takes
     independent, sufficient estimates of the  effect and its variance
     for each gene in a multi-slide microarray experiment and returns
     an odds ratio for each gene: log( Pr(the gene is differentially
     expressed) / Pr(the gene is not differentially expressed) ).

_U_s_a_g_e:

     bayesFun(...)

_A_r_g_u_m_e_n_t_s:

     ...: arguments for the fuction 'lm.series' and 'ebayes'

_D_e_t_a_i_l_s:

     see 'ebayes' for details.

_V_a_l_u_e:

     Returns a function.

_A_u_t_h_o_r(_s):

     Yee Hwa (Jean) Yang

_R_e_f_e_r_e_n_c_e_s:

     I. Lnnstedt and T. P. Speed.  Replicated Microarray Data.
     Statistical Sinica, Accepted, see
     http://www.stat.berkeley.edu/users/terry/zarray/Html/papersindex.h
     tml

_S_e_e _A_l_s_o:

     'lm.series','ebayes'

_E_x_a_m_p_l_e_s:

       bayesFun()

