Similar Binding Profiles


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Documentation for package ‘SimBindProfiles’ version 1.4.0

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SimBindProfiles-package Similar Binding Profiles, identifies common and unique regions in array genome tiling array data
bound.cutoff A Sample Data object
compensationRegions Classify two Binding Profiles - Compensation
compR A Sample Data object
eSetScatterPlot Scatterplot of ExpressionSet object
findBoundCutoff Find the bound.cutoff
increasedBindingRegions Classify two Binding Profiles - Increased Binding
increasedR A Sample Data object
pairwiseRegions Classify two Binding Profiles
plotBoundProbes Plot coloured bound probes
precomputed A Sample Data object
probeAnnoFromESet Build a probeAnno from ExpressionSet
probeLengthPlot Plot the probe length frequency
readSgrFiles Read sgr data
SGR A Sample Data object
SimBindProfiles Similar Binding Profiles, identifies common and unique regions in array genome tiling array data
threewayRegions Classify three Binding Profiles